Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4644 |
Symbol | |
ID | 6127460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1651139 |
End bp | 1653229 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641651735 |
Product | type III secretion FHIPEP protein |
Protein accession | YP_001778268 |
Protein GI | 170737008 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.207433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.243836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTGA TCGACCTACT CAAGCGCCTG AAGTTTGCTG CGCCTCTCGC CCTGTTCACC ATCTTGGCGA TGGTAATCCT GCCGCTTCCG CCAGCTGCAT TGGACGTCAT GTTCACGTTC AACATCGTGC TATCCATTGT GGTGGTAATG GTGGCCGTGA CCGTTAAGCG ACCGCTGGAC TTCTCGGCCT TCCCGACCGT TATCCTGGCT GCCACGCTGA TGCGCCTGAC ATTGAACGTC GCATCAACAC GCGTAGTTTT GCTTAATGGC TACACGGGCG CGAGCGCAGC AGGCCAAGTG ATCGAATCGT TCGCCAATGT AGTGATCGGC AGCAATTTCG TGGTCGGCCT GGTCGTCTTC GTGATCCTTA TGATCATTAA CTTCGTAGTG GTCACCAAGG GCGCGGAACG CATCTCAGAA GTGTCGGCGC GTTTCACACT CGACGCGCTG CCCGGCAAGC AGATGGCCAT CGACGCCGAT CTGAACGCCG GTGTCATCAC GCAGACGCAA GCCCAGCAAC GCCGCAAAGA AGTTACGACC GAAGCTGACT TTTACGGCGC CATGGATGGC GCATCGAAGT TTGTGCGCGG CGACGCCATC GCCGGCATTC TGATTCTCAT CACCAACATG ATTGGCGGCG TGATCATCGG CGTACTCATG CACGGCTTGC CTGCAAGCGA GGCATTCCAC AAGTATGCGC TGCTGGCCAT CGGGGACGGC CTGGTCGCGC AAATACCCGC CCTGCTGCTG TCCGCCGCCG CCGCGGTAAT CGTCACCCGC ATCGACGACG CGCGAGACTT CGAGGAGCAG GTCGGCCAGC AGTTGCTCGC TTCGCCGTTG GTGCTGTTCA GCGCCGCCGC ACTGATGGCC GCGCTGGGCC TGATCCCGGG CATGCCGACA TTGGTGTTTC TTTGCTTTGC AGCAGTACTC GGTTACGTCG GCTATCGGAT GACGCAGCGT ACTTCGCCAT CCGCAGCGAT CGAGGCGGAA GAAACCGCCC GCGTCATGCA AGCCACGCTA GCCGCGCCCG GCAACGAGCC GTTCGACTGG AGCAGCCTGC CGTATGTGGA CGCGCTTTCA GTATCCCTCG GCTACAAGCT GGTGGAGATG TTGGACCGCG CTCAAGGCGC GCCGCTGGTG CGCCGCCTGC ATGGCACCCG ACAAACCCTA TCGGAACAAC TCGGCTTCCT GCTACCGCCC ATCGGCGCGC GCGACGACAT GAGCCTGCCG CCCTCCAGTT ACACCATCAT CCTCAATGGC ACCACACTGG CTCAGGCCCA AGTGCACCCG GGAAAGCTGA TGGCCATTCC GTCACCGACC GTCTACGGGG AATTGGATGG TACACCCGAC ATCGACCCTG CCTACGGCAT GCCCGTCACG TGGATCGAGC CCGACCAGAA GGCCCATGCA CTCGGCCTCG GCTACCAGGT TGTCGATTGC GCGACGGTAA TCGCCACGCA TGCAGCCAAG TTAATTCGCG AAACGATCCC CGACCTGTTC AGCTACGACA ATGTAACCGC CATCATCGAA CGCCTGACGG CCATTGCGCC AGTGCTGGCC GATGCGCTGG GGAAATGCCT CACGCACAGT CAGTTGCGCA AGGTATTCCG TACGTTGTTG GCCGAGGACG TGTCGATCAA GGACATCGAA ACCGTGTCCG CCACCCTGGT GGAGGCCGCA GAAACCACCA AGGACCCGCT ACTGCTCGTG GCCGAAGTCC GCTGCGCGCT GCGTCGCCAG ATCGTGGCAG GACTTGGTGC CCAGCACGAG GCGCTCAAAG GCTTCAGCCT GACGGTGGAA CTCGAGAACA TTCTGCTGAA TGCCCTAAGT CTCGCGGAGC AATCGGGCAC GCGTGTGCCG CTGGACAACT TCCCAGTCGA ACCGAACGTG CTCTCACAGT TGCAGACCCA TATGCCGGCG GTGGTCGAAC AATTGAAACA AATGGGCGTC GCCCCGGTGC TGATCGTGGT GCCACGCATT CGCCCGATGC TCGCGCGATA CGCCAAACTG TTCTCACCGG ACTTAACCGT CCTGTCATAC AACGAAGTTC CCGACAACAA GGAAGTCAGC ATTGTCGGCA CGCTCGGATG A
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Protein sequence | MNVIDLLKRL KFAAPLALFT ILAMVILPLP PAALDVMFTF NIVLSIVVVM VAVTVKRPLD FSAFPTVILA ATLMRLTLNV ASTRVVLLNG YTGASAAGQV IESFANVVIG SNFVVGLVVF VILMIINFVV VTKGAERISE VSARFTLDAL PGKQMAIDAD LNAGVITQTQ AQQRRKEVTT EADFYGAMDG ASKFVRGDAI AGILILITNM IGGVIIGVLM HGLPASEAFH KYALLAIGDG LVAQIPALLL SAAAAVIVTR IDDARDFEEQ VGQQLLASPL VLFSAAALMA ALGLIPGMPT LVFLCFAAVL GYVGYRMTQR TSPSAAIEAE ETARVMQATL AAPGNEPFDW SSLPYVDALS VSLGYKLVEM LDRAQGAPLV RRLHGTRQTL SEQLGFLLPP IGARDDMSLP PSSYTIILNG TTLAQAQVHP GKLMAIPSPT VYGELDGTPD IDPAYGMPVT WIEPDQKAHA LGLGYQVVDC ATVIATHAAK LIRETIPDLF SYDNVTAIIE RLTAIAPVLA DALGKCLTHS QLRKVFRTLL AEDVSIKDIE TVSATLVEAA ETTKDPLLLV AEVRCALRRQ IVAGLGAQHE ALKGFSLTVE LENILLNALS LAEQSGTRVP LDNFPVEPNV LSQLQTHMPA VVEQLKQMGV APVLIVVPRI RPMLARYAKL FSPDLTVLSY NEVPDNKEVS IVGTLG
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