| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4625 |
|---|
| Symbol | |
|---|
| ID | 6127445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1619593 |
|---|
| End bp | 1620588 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641651720 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001778253 |
|---|
| Protein GI | 170736993 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00069577 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA CTTCCATCCG CCGCCCCGAC GCCGACGACC CGTTCGCGCG CAGCTTCTCG
ACCTGCTATG CCGGCGTGGT CACGTTCCTC GCCGTCGTCA CCGAAGGCAG CTTCGCGCGC
GCCGCCGATC GCCTCGGCGT CGGCCGCTCG TCGGTCAGCC GCCACGTGCA ACGGCTGGAG
GACCGGCTCG ACGCACGCCT GTTCCAGCGC ACCACGCGCA GCATGTCGCT GACGCGCGAA
GGCGAGCTGT TCTACGAAAA CTGCCGGCCC GGCATCGAGC ATCTGGCGCA GGCGCTCGAG
GACATGCGCG AGCTGCGCAG CGGGCCGCCG AGCGGACACC TGCGCGTCGG CTCGACCCCG
GGCTTCGGCC GCAAGGTCAT CGCGCCGCTG CTGCGCGATT TCCATGCGCA GTATCCGGAC
ATCACGCTCG ACCTGCTGCT GAACGACCGC CCGGCCGATT TCTCCGCCGA CCGCATCGAC
GTCGCGTTTC GCGACGGCCG CATGGAGGAC AGCGCGATCG TCGCGCGCCG GCTGATTCCG
ATGCAGATGA TCGTCTGCGC GTCGCCGTCG TACGCACACC GGCACGGCTT GCCGCGCCAC
GTCGACGACC TCGCGCGGCA TCGCTGCATC AACCTGTGCA CCGCGTCGGG CCGCGTGACG
GAATGGGAAT TCAGGATCGA CGGGGTGACG CAGCAGCGCC AGCTCACCGC GCATCACACG
TTCAACGACA TCGATCTCGT CGTGAGGGCG GCGCTCGACG GGCTCGGCAT CGCGCAACTG
CCCGCGTACC AGGTGTGCGA CCTGCTCGCC GACGGCCGGC TGGTGAGCTG TCTCGGCCAG
CACGCGCCGG ACGACGGCGG CCACTATCTC TGCTACCTGA GCCGCAAGCA CCTGCCCACG
CGCATCCGCG TGTTCATCGA CTACATGATC GAGCAGACGC GTGCGCGCGA CCTGCAGTGC
CTGACGACGA TGACGACGCT GGAGGCGGTC GATTGA
|
|---|
| Protein sequence | MPDTSIRRPD ADDPFARSFS TCYAGVVTFL AVVTEGSFAR AADRLGVGRS SVSRHVQRLE
DRLDARLFQR TTRSMSLTRE GELFYENCRP GIEHLAQALE DMRELRSGPP SGHLRVGSTP
GFGRKVIAPL LRDFHAQYPD ITLDLLLNDR PADFSADRID VAFRDGRMED SAIVARRLIP
MQMIVCASPS YAHRHGLPRH VDDLARHRCI NLCTASGRVT EWEFRIDGVT QQRQLTAHHT
FNDIDLVVRA ALDGLGIAQL PAYQVCDLLA DGRLVSCLGQ HAPDDGGHYL CYLSRKHLPT
RIRVFIDYMI EQTRARDLQC LTTMTTLEAV D
|
|---|
| |