Gene Bcenmc03_4587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4587 
Symbol 
ID6127408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1578079 
End bp1579008 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID641651683 
Productgalactose 1-dehydrogenase 
Protein accessionYP_001778216 
Protein GI170736956 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00120434 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGATC CGATTTCGCT GGGTGTCGTC GGGATCGGCA AGATCGCGCG CGACCAGCAT 
CTGCCGGCGA TCGCCGCCGA GCCGGGCTTC GCGCTGACCG CCTGCGCGAG CCGCCACGCG
GAAGTCGCGG GGGTGCGCAA CTATCCCGAT CTGCGCGCGT TGCTGGCCGC GGAGCCCGAA
CTCGACGCCG TGTCGCTGTG CGCGCCGCCG CAGGTGCGCT ACGCACAGGC GCGCGCGGCG
CTCGAAGCCG GCAAGCACGT GATGCTCGAG AAGCCGCCGG GCGCGACGCT CGGCGAAGTG
GCCGCGCTGG ATGCGCTGGC CCGCGAGCGC GGCCTCACGC TGTTCGCGAC CTGGCATTCG
CGCTGCGCGA GCGCGGTCGA GCCGGCACGC GCGTGGCTTG CGCAACGCAC GATCCGCGCG
GTGCAGGTGC GCTGGAAGGA AGACGTGCGG CGCTGGCATC CGGGGCAGCA GTGGATCTGG
GAGCCGGGCG GCCTCGGCGT GTTCGATCCG GGCATCAACG CGTTGTCGAT CGTCACGCGC
ATCCTGCCGC GCGAGCTCGT GCTGCGCGAG GCGACGCTCA TCGTGCCGAG CGACGTGCAG
ACGCCGATCG CGGCCGAACT CGATTGCGCG GATACCGACG GCGTGCCGGT GCACGCGGAA
TTCGACTGGC GCCACGGCCC GGTCGAGCAA TGGGAAATCG CGGTCGACAC GGCCGACGGC
GTGCTCGCGA TCAGCCGCGG CGGCGCGCAA CTGTCGATCG CGGGCGAGCC GGTCGAGATG
GGGCCGGAGC GCGAGTACCC GGCGCTGTAT GCGCACTTCC ACGCGCTGAT CGCGCGTGGC
GAAAGCGACG TCGACGTGCG GCCGCTGCGG CTCGTCGCCG ATGCCTTCCT GTTCGGCCGG
CGCGTGCAGA CCGACGCGTT CGGCCGCTGA
 
Protein sequence
MSDPISLGVV GIGKIARDQH LPAIAAEPGF ALTACASRHA EVAGVRNYPD LRALLAAEPE 
LDAVSLCAPP QVRYAQARAA LEAGKHVMLE KPPGATLGEV AALDALARER GLTLFATWHS
RCASAVEPAR AWLAQRTIRA VQVRWKEDVR RWHPGQQWIW EPGGLGVFDP GINALSIVTR
ILPRELVLRE ATLIVPSDVQ TPIAAELDCA DTDGVPVHAE FDWRHGPVEQ WEIAVDTADG
VLAISRGGAQ LSIAGEPVEM GPEREYPALY AHFHALIARG ESDVDVRPLR LVADAFLFGR
RVQTDAFGR