| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4581 |
|---|
| Symbol | |
|---|
| ID | 6127402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 1572074 |
|---|
| End bp | 1572781 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641651677 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001778210 |
|---|
| Protein GI | 170736950 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.000712688 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA CCGTCAAGAC AGGTACGGCA ACGGCTTCCG GCACGGCGCG CGCACGCCGG
CCGACGCAGG CGGAGCGCAG CCAGGCGACG CGTGAGCGCG TCATTGCCGC CGCGATCGCG
CTGCTGCACA AGGAAGGCTA TTCGGGCGCG ACGACGCTTG CGATCCGGCG CGAAGCCGAC
GTCAGCATGG GCGCGCTGCA GCACCAGTTT CCGACCAAGG CGGAATTGAT GGCCGCGGTG
CAGGAACGGC TCGCCGGCGA TCGCTTCGCG CAGTTCGAAC GCGCGTCGCG CAGCGCCACG
ACGCCGCTCG AGCGGATCGA CCGGATGCTC GATGTCGCCG GCGCGCTCAT CGGTACGCCG
CTGTTCGCCG CCAGCATGGA GATCCAGCTG GCGCGGCGCG CCGACAAGGA ACTCGACGAG
GCCGTGACCC GCGTCCTCGA GCCGTTCAAG GAGGGGTTTC GCGCATTGAT GCGCGATGTC
GTCGTGGGTT TCGATCGGGA GACCGCGCTC AAGGTCGCGC AATTGCAGTT GCTGGGCGCA
TCGATGATCC GCGGGCTGAC CATCGACGTC GTGACGGGCG GCGAACCGGC CGCGGCGCGG
GCCGCATTCG CGCTGTGGCG CGACATCGTG CTGCGGCAAA TCACGGACAT GACGCAATCC
CCCGCGCCCG CGCCGACGAA AACCGACAAG CGCCGCGCTT CACGCTGA
|
|---|
| Protein sequence | MKKTVKTGTA TASGTARARR PTQAERSQAT RERVIAAAIA LLHKEGYSGA TTLAIRREAD
VSMGALQHQF PTKAELMAAV QERLAGDRFA QFERASRSAT TPLERIDRML DVAGALIGTP
LFAASMEIQL ARRADKELDE AVTRVLEPFK EGFRALMRDV VVGFDRETAL KVAQLQLLGA
SMIRGLTIDV VTGGEPAAAR AAFALWRDIV LRQITDMTQS PAPAPTKTDK RRASR
|
|---|
| |