| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4548 |
|---|
| Symbol | |
|---|
| ID | 6127370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1533552 |
|---|
| End bp | 1535801 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641651645 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001778178 |
|---|
| Protein GI | 170736918 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000713404 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.70634 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCG AACGGCCTGC CGACTCCCGC GCCCCCGCCC CTTCTCCCGC CGACGACTGG
CAGGATGACG GCAGCTACGC GTCCGGCGCA CCCGAGCACG ATTTCGCGGT GCGCCGCGTG
ACGCTGATCG TGCTGCTCGT CGCGGCGATC GTGCTGCCGT GCATCTACGT GGTGGTGATG
GCGTACAACG ACCTGAAGGC GCGCGAGGCC GCCGCGAGCG ACGTGACGAT GCGCACGGTG
CGCGTCGCCG AGGAACATGC GCTCAAGGTA TTCGACCTGA GCGAAACGCT CGATGCGCGC
ATCGTCGATC TCGTGCAGGA CATGGACGAC GCGACCGTGC GCAGCAAGGA GTCCGACATC
CACGAAGCGC TGAACACGAT CGGCGGCGGC TATCCGCAGG TGGCCGCCGT GTCGATCTTC
GGCGCGAGCG GGATGCTGCT CGCCAACAGT CTCTACTATC CGGCGCCCTA TGCGTCGATC
GCGAACCGCG ACGATTTCGC CGGCATCCGC GACGGCAAGG TCATCGAACA CATCTCGCGG
CTGATGATGG GGCCGCTCAA GCTCGAGAAC ATTCCCGTCT TCAACACCGG CGTCGCGCGA
CGCCATAGCG ACGGTTCGTT CGCCGGCATG GTGTCGATCG CGCTGAAGTC GTCGTATTTC
AATGCGTTCT ACCGCGACCT GCTCGGCGGC GCGAGCACGC CGATGACGAT GGCGCTCGCG
CGCTCGGACG GCGCGGTGAT CGCGTCGTAT CCGCCGCCGC CGTCGCTCGC GCACACCGAT
CGCTCGGTCA CGTTCGGCAA CCCGCGCAAC GATCCGCGCG CGGGCGTGGT GCGCGTGGGC
CACGACGGCG CGAGCAGCGA GATCGTCGCG TATCGCCAGG TCGGCAGCTA TCCCGTCTAC
GTGAGCTGCG CGTACCGCAC GTCGGCGATC TGGCATGAAT GGTACGAACA CCTGAGCGTG
CTGTTCCTCT CGATGTTCGC GCCGTCGGTC GCACTGTGGT CCGTGATCTG GCTGTCGCTC
AAGCGGCTGA AGGCGGAAGA GGAAGCGTGG GACCGCTGGC AGGCCGAAGC GTCGATGCGG
CGCTCGATCG AATCGGCGTA CCGGCAGTCG CGCAAGATGC AGGCGCTCGG CAATCTCGTC
GGCAGCGTCG CGCACGACTT CAACAACCTG CTGATGATCA TCTCGAGCAA CGTGCAGATC
GCGCGGCGAC GCGGTGTCCA GCATCTCGAC AAGGAGCTCG GCGCGATCGA GCGCGCGCTG
AAGAACGGCC AGTCGCTCAC GCGCCAGTTG CTCGGCGTCG CGCGCAAGCA GCCGCTGCAC
AACGAGACGA TCGACATCGG GCAATGGCTC GGCACGTGCC GCGAACTGCT GAAGACGTCG
CTCGGGTCGA AGTCGTCGCT GGTCGTCGCG ATCGAGCCGG GCGTCTGGCC GATTCGCGTC
GATGTCGCGG AGCTCGAGCT CGCGGTGATC AACCTCGCGG TCAACGCGCG CGACGCGATG
GCGACCGGCG GACGCTTCAC GGTCGGCGCA CGCAACGTCA CGCTGCGCCG CGAGGACGGC
TTCCCGCTCA CCGGCGACTT CGTGCAGATC TCGCTCGACG ACACGGGTTC GGGCATGGCG
CCCGACGTGC TCGCCCGTGC GTTCGAACCG CTGTTCACGA CGAAGGCGCA GGGGATGGGG
ACGGGGCTCG GCCTGCCGCA GGTATTCGCG TTCTGCGAAC GCTCGGGCGG CCTCGCGACG
ATCGACAGCG CGGTCGGCGC GGGGACGTCG GTGCGTCTGT ACCTGCCGCG CGCGCGGGCC
GAGGACGTCG TCGCACGGCC GGCGGCCGTC GCGCACGACG CGGGCAACGG CGCGCTCGCC
GGTCTGCACG TGCTGCTGGT CGAGGACAAC GACGAAGTCG CGGCCGGCAC GGAAGCGCTG
CTGTCGCTGC TCGGTCATCG CGTGACCTAT GCGCCCACCG CCGACGACGC GTTGCGCCTG
ATCGAGGGCG CCGCCGCGAA CGACGCGTTC GATCTCGTGA TTTCGGATAT CCACATGCCA
GGCCGCCTGA ACGGCATCGA CCTGGCAGAA GCGGTCGAAA AGCGGCCGGG GAAGCTGCCC
GTGATTCTCG TCACGGGTTA TGCGGAGGAG CTCGACCGCA CGCGCACCGT CAACGTCCGC
GTGCTGTCGA AGCCGTTCGA CATCGCGCTG CTCGACGAGA TCCTGCTGGG CATCCGCGAA
GCGCGCGACG CACGACACGC CGGCGCGTGA
|
|---|
| Protein sequence | MTSERPADSR APAPSPADDW QDDGSYASGA PEHDFAVRRV TLIVLLVAAI VLPCIYVVVM
AYNDLKAREA AASDVTMRTV RVAEEHALKV FDLSETLDAR IVDLVQDMDD ATVRSKESDI
HEALNTIGGG YPQVAAVSIF GASGMLLANS LYYPAPYASI ANRDDFAGIR DGKVIEHISR
LMMGPLKLEN IPVFNTGVAR RHSDGSFAGM VSIALKSSYF NAFYRDLLGG ASTPMTMALA
RSDGAVIASY PPPPSLAHTD RSVTFGNPRN DPRAGVVRVG HDGASSEIVA YRQVGSYPVY
VSCAYRTSAI WHEWYEHLSV LFLSMFAPSV ALWSVIWLSL KRLKAEEEAW DRWQAEASMR
RSIESAYRQS RKMQALGNLV GSVAHDFNNL LMIISSNVQI ARRRGVQHLD KELGAIERAL
KNGQSLTRQL LGVARKQPLH NETIDIGQWL GTCRELLKTS LGSKSSLVVA IEPGVWPIRV
DVAELELAVI NLAVNARDAM ATGGRFTVGA RNVTLRREDG FPLTGDFVQI SLDDTGSGMA
PDVLARAFEP LFTTKAQGMG TGLGLPQVFA FCERSGGLAT IDSAVGAGTS VRLYLPRARA
EDVVARPAAV AHDAGNGALA GLHVLLVEDN DEVAAGTEAL LSLLGHRVTY APTADDALRL
IEGAAANDAF DLVISDIHMP GRLNGIDLAE AVEKRPGKLP VILVTGYAEE LDRTRTVNVR
VLSKPFDIAL LDEILLGIRE ARDARHAGA
|
|---|
| |