Gene Bcenmc03_4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4488 
Symbol 
ID6127310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1461104 
End bp1461724 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID641651585 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001778118 
Protein GI170736858 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC TCGCTTTTTC CCACGGCGCC GCACTGTGCG CGTCGCTCAT CGTCACCATC 
GGCGCACAGA ACGCATTCGT GCTGCGCCAG GGCATCATGC GCTCGCACGT CGGCAAGATC
GTGCTGCTGT GCGCGGTGTC CGACATGATC CTGATCGGCG CGGGCGTCGG CGGCGCATCG
GTGCTGGTCG AGCGCTATCC GACCTTCGTC CATGCGGTGC TGTACGTGGG CCTCGCGTAT
CTCGCGTGGT TCGGCATCAA CGCGCTGCGC CGTGCGTTCA AGCCGGGCCA CGACACGCTC
GACGTGCGCG GCGACGCGGT CGCCCCGCCG CCGCAACGCG CGCTCGCGAT CGTACTGATG
ACGCTCGCAT TCACGTGGCT CAACCCGCAC GTGTATCTCG ACACGTTCCT GCTGATCGGC
ACGGCCGGCG CGCGCGAGCC GGAAGGCGCG CGGCTCGCGT TCGCGATCGG CGCGATGACG
GTCAGCGTCG TGTGGTTCCT CGGGCTCGGC TATGGCGCGC GATTGCTGGC GCCGTGGTTC
CGCAAGGCGG TCGCGTGGCG CGTGCTGGAC GGCGCAATCG GCAGCATGGT GCTGTTTCTC
GCGGCCGTGC AGTTGCGGTA G
 
Protein sequence
MNWLAFSHGA ALCASLIVTI GAQNAFVLRQ GIMRSHVGKI VLLCAVSDMI LIGAGVGGAS 
VLVERYPTFV HAVLYVGLAY LAWFGINALR RAFKPGHDTL DVRGDAVAPP PQRALAIVLM
TLAFTWLNPH VYLDTFLLIG TAGAREPEGA RLAFAIGAMT VSVVWFLGLG YGARLLAPWF
RKAVAWRVLD GAIGSMVLFL AAVQLR