| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4400 |
|---|
| Symbol | |
|---|
| ID | 6127227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 1374264 |
|---|
| End bp | 1374989 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641651502 |
|---|
| Product | OmpW family protein |
|---|
| Protein accession | YP_001778035 |
|---|
| Protein GI | 170736775 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAA TCAGCGCAGG AACCGTCGTA CTGGTCGCGG CCATCTCTGG CGCGCATGCT
CAATCAGCCG GTCAGTGGGT AGTCAATGCC GGCTGGTCCC ATTTTGCGCC GCAGGGGTCG
GCTGATCCGC TGACCGTCAA TGCGCTCGGC CAGTCACAAG TGATGACCGG CAGCGGTGGG
GAGATCGCAA GCGGCGATAC GTTCGGACTG ACCGCGACGT ACTTCCTGAC CGACCATATC
GCGGCGACGA CGGTCATGGG TTTTCCGCCG ACATGGCACT TGAACGGCGC AGGTACGCTC
AGCGGTTTCG GCGAGCTGGG GACCGCGCGG GCCTGGAGTC CGGCGATCAT CTTCAACTAC
TACTTCGGCC AGCCGAATGC TCGGTTCAGG CCGTATCTGG GCGCAGGCGT CACTTACACG
TGGTTCAGCA ACATCAAGCT CAGCAACCCC GTTTCCACCG GCCAGATCTA TTTCTCGCCG
ACCGTCGGGA CAGCGCTCGA GGGGCCGACA TCCGTGTCAC TCAGCAATTC CTTCGCGCCC
GTCGTCAACG GCGGCCTGAC CTACAACATC GATTCTCACT GGTCGATCAA CGCGTCGGTG
GCGTATTCGT GGGTATCGAC GCGCGCCACG CTCACTACCC GGTCATCCGT CGGCACGGTC
ACGAGCACCA GCAAATTCCG GGTCAATCCG ATCGTGACGT TCCTGTCGGT CGGATACCGC
TTCTGA
|
|---|
| Protein sequence | MKRISAGTVV LVAAISGAHA QSAGQWVVNA GWSHFAPQGS ADPLTVNALG QSQVMTGSGG
EIASGDTFGL TATYFLTDHI AATTVMGFPP TWHLNGAGTL SGFGELGTAR AWSPAIIFNY
YFGQPNARFR PYLGAGVTYT WFSNIKLSNP VSTGQIYFSP TVGTALEGPT SVSLSNSFAP
VVNGGLTYNI DSHWSINASV AYSWVSTRAT LTTRSSVGTV TSTSKFRVNP IVTFLSVGYR
F
|
|---|
| |