| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4258 |
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| Symbol | |
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| ID | 6127088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1213385 |
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| End bp | 1214419 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641651363 |
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| Product | porin |
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| Protein accession | YP_001777896 |
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| Protein GI | 170736636 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0937831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000204948 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGAAGA TAGTTTGGGG CTTGGCGCGC GCTTGCGCTG TTTCGGTTGG GATGTGGAGC
ATCCCGGGCG TCGTCCACGC CCAGTCTTCG GTATCGCTTT ACGGTTTGAT CGACGCCTTT
GTTGGCGAAA CGCATGCGCC AGGCGCAGCC GGCAGTGCCT GGCAGGTAGG CTCAGGCGGG
ATGACGACGT CATATTGGGG CGTGTCGGGA TCGGAAGATC TTGGCCACGG CATGAAGGCG
GTGTTCACGC TGGAGAGCTT TTTCAGAGTC AACGCTGGTC AGCTCGGCTC ATTCAATGGT
CAGTCATTCT TCGGTCGCAA TGCCTTTGTC GGACTGAGCG GACGCTTTGG GGAGGTGACG
GTCGGGCGCA ATACGGCACC CCTGTTCGTC TCCACGTTAC TCTTCAATCC ATTCGGTAAC
TCGTTCGCGT TTTCGCCGAT GATCTCACAC GGTTATCTGG GCTCGGCCAT GGGGGCGGCT
TCCGTGCAAA GCGATACGGC GATCGACAGT TCGGTGTTGT ATCAGACACC GGAGATTGGA
GGGCTTTCTG GAAGCCTGCT CTATAGCAAT GCGGGTGTGG CCGGCCACAC TGGGCAGGCG
AACTATAGTG CCAACGTGCT TTACTTCGCC GGTGCGTTTT CGGCAACGGC CGCAGTGCAA
AGTCTGCACA CAGCGTCGCT TTTTCTGAAT GGTGCGACGG CACAAACGGC ATGGCTTGTC
GGCGGTGCCT ATCGGATCCA CGCAACGAAG CTCATGTTCC AGTACGAGCG GGTGAGCGAC
AATAGCAACG TGACCGACGA CACCGTGCAG GTGGGAGCAA GCGCGCGATT CGGAATGGGC
AGTATGCTGC TGTCGTGGGC GGGCACGCGG CGGCGTCCTG TCACCGGTTC CGGCATCCGA
TGGTCGACGT TCGCGCTGGG CTACGACTAC CCACTGTCGA AGCGCACTGA CATCTATGCG
GCATGGCGCT ATGACACGAT TACGCATGCC TCATCAGGAA ATGGCATCGG AGCCGGGGTG
CGGATGCGGT TTTGA
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| Protein sequence | MRKIVWGLAR ACAVSVGMWS IPGVVHAQSS VSLYGLIDAF VGETHAPGAA GSAWQVGSGG
MTTSYWGVSG SEDLGHGMKA VFTLESFFRV NAGQLGSFNG QSFFGRNAFV GLSGRFGEVT
VGRNTAPLFV STLLFNPFGN SFAFSPMISH GYLGSAMGAA SVQSDTAIDS SVLYQTPEIG
GLSGSLLYSN AGVAGHTGQA NYSANVLYFA GAFSATAAVQ SLHTASLFLN GATAQTAWLV
GGAYRIHATK LMFQYERVSD NSNVTDDTVQ VGASARFGMG SMLLSWAGTR RRPVTGSGIR
WSTFALGYDY PLSKRTDIYA AWRYDTITHA SSGNGIGAGV RMRF
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