Gene Bcenmc03_4198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4198 
Symbol 
ID6127031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1133377 
End bp1134087 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content58% 
IMG OID641651306 
ProductP-type DNA transfer protein VirB5 
Protein accessionYP_001777839 
Protein GI170736579 
COG category 
COG ID 
TIGRFAM ID[TIGR02791] P-type DNA transfer protein VirB5 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.835189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT ACCTATTCAC GCATATCGTA CTGTTGAGCG CCGTTGTCGC GGGTGCGGCG 
TCTTTTATTG AGCCGGTGAA TGCGGAAATC TATTCGGTCT ATGACGAAAA GAACGTCGCT
CAGGCGATCG CGATGGTCGG GCAGCTCAAA CAACAAGTGC AGCAGGAGAT GGCGTTGTAC
CGCTCGCTGA GCGGCGCGCG CGGCTTTGGT GCGTTGCTGG ATCGACCGGG GGTGGTCAAT
GCGCTGCCGG ACAATTGGCA GAGCGTGTAT GCCGCGATTC GCGAGGGTGG GTATGCCGGG
TTGACTGGTC CGGCTCAGGC ACTGCGCGCG CAAAGCAAGC TCTACGACTG TGAAGACCAG
CAGGGCATCG ATCAGCGAAT TTGCCAGCGC GCGTTAAACA AGCCATTTCA AGATAAGGCG
CTTGGTCTGC AGGCATATCA GACCGAGCTT GCCGAACTTG ACCGGATTGA ACTTCTGATG
CGGCACATCG ACACGACACG GGATCCGAAG GGTATCGCGG AACTGCAAGC ACGAATCCAG
TCGGAGAGTG TGGCAGTCGG CAACGAAATG ACGAAGTTGC AGATGTTCAA GATGCTCGCG
GAAACCGAGG ATCGCTTGAT TGCCGAGCAG CAGACTGAAC TGCTCCTCAA GCGAGCGGGC
AACACGCGTC GACTCCAGGA TCAGATGGCG CCGGTCACGT TTGGCCGATA A
 
Protein sequence
MKRYLFTHIV LLSAVVAGAA SFIEPVNAEI YSVYDEKNVA QAIAMVGQLK QQVQQEMALY 
RSLSGARGFG ALLDRPGVVN ALPDNWQSVY AAIREGGYAG LTGPAQALRA QSKLYDCEDQ
QGIDQRICQR ALNKPFQDKA LGLQAYQTEL AELDRIELLM RHIDTTRDPK GIAELQARIQ
SESVAVGNEM TKLQMFKMLA ETEDRLIAEQ QTELLLKRAG NTRRLQDQMA PVTFGR