| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4001 |
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| Symbol | |
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| ID | 6126834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 935775 |
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| End bp | 937775 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641651109 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001777642 |
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| Protein GI | 170736382 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.077192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCC CGACACCTAC CGTTAATCCC GGCCTGGCCG GCGGCGACGC GCACGCGTTG
CCGCATGCGC CGCTGCCGGC CGGCTTGCCC GACCCGGCGA CGCTCGCGCG GCTCGCGTCC
GAGTTCTTCG CGACGCCGCC CGGGCAGGCC ACCGCACCCG GGTTGTCGGC GGGCAGCGGC
GCGGTCGGCG GCGTGCCGTC GGCCTTGCCG GCCGCGGCGC CGATTCTCGC GTCGGTGAGC
AACCCGGTAC CGGGCGGTTC GCCGCTCGCG GGCCCGGGCG GGGCGGGCAC CGGCGTACCG
GGGCTCGCGC TGCCGCAAGG CAAGGTACCG GGCGCGAACC TCGCGCCGTC CGCGCCGACG
CACGTGCTGT CGCTCGGCAA CCGCGCACCC GCGCTCGCGC CGCATGCGGC CGCGCAGAAC
GGGCTGCCCG ACAACGTCGT ATCGATCGCG CCCGCGCTGG AGCCGCGCGT CGGCGGCGCG
GCGCTCGGCG TGCCGCAGGT GAATGCGCCG GCACCGGAAG GCGCGGCGAA GGCGTCGCCG
TACTACTTTA CCGACGGTTC GCTGCAGGGC TGGCAGGGGA CGCCGCAGGA CATCGTCGTG
CCGTCGAACG GCCTCGTGTC GCCGGAAGCG TTCGGGTTGC CGGGCGACGA TGCGCTGCGC
GCGCTGCTCG CCGTGCAGCG CGACGTGCCG GTGTCGAGCG CGTCGGGCGC GGATGTGCCG
CGTTATTTCA TCGACGACTC GCACGCAGCC GAGCCGCAAG GCCAGCTGTA TCGCGGCACT
CATCCGCCGT TCGACGTGAA CGCGATCCGC CGCGATTTCC CGATCCTGCA GGAGCGCGTG
AACGGCAAGC AGCTCGTCTG GTTCGACAAC GCGGCGACGA CGCACAAGCC GCAGGCCGTG
ATCGACCGCC TCGCGTACTT CTACGCACAC GAGAACTCGA ACATCCACCG CGCGGCGCAC
GCACTGGCCG GCCGCGCGAC GGATGCGTAC GAGCATGCAC GGGAAACGGT GCAGCGCTTC
ATCGGCGCAT CGTCGCCCGA CGAGATCGTG TTCGTGCGCG GCACGACCGA GGCGATCAAC
ATGATCGCGA AGACGTGGGG CGTGCAGAAC GTCGGCGAAG GCGACGAGAT CGTCGTGTCG
CATCTCGAGC ATCACGCGAA CATCGTGCCG TGGCAGCAGC TTGCCGCGCT CAAGGGCGCG
AAGCTGCGCG TGATTCCGGT CGACGATTCG GGGCAGGTCC TGCTCGACGA ATACCGGAAG
CTGCTCAACG ATCGCACGAA GATCGTGTCG GTCACGCAGG TGTCGAACGC GCTCGGCACG
GTCGTGCCGG TGAAGGAGAT CGTCGAGCTT GCGCATCGCG CGGGCGCGAA GGCGCTGGTC
GACGGTGCGC AGTCGATCTC GCACATGCGT GTCGACGTGC AGGCGCTCGA CGCGGATTTC
TTCGTGTTCT CCGGGCACAA GATCTACGGG CCGACCGGGA TCGGCGTGGT GTACGGCAAG
CGCGCGATCC TCGACGACAT GCCGCCGTGG CAGGGTGGCG GCAACATGAT CGCGGACGTG
ACGTTCGAGC GCACGGTGTT CCAGCCGCCG CCGAACCGCT TCGAAGCCGG CACCGGCAAC
ATCGCGGATG CGGTGGGGCT CGGCGCGGCG CTCGACTACG TGAACCGTGT CGGCATCGAG
AACATCGCTC GCTACGAGCA CGATCTGCTC GCGTATGCGA CGAGCGTGCT CGCGCCGGTG
CCGGGCGTGC GGCTCGTCGG TACCGCGCGC GACAAGGCGA GCGTGCTGTC GTTCGTGCTG
AAGGGCTATG AAACCGAGGA AGTCGGGCAG GCGCTGAACG AAGAGGGCAT TGCGGTGCGC
TCGGGGCATC ACTGCGCGCA ACCGATTCTG CGGCGCTTCG GGCTCGAAGC CACGGTGCGG
CCGTCGCTCG CCTTCTACAA CACGTGCGAT GAAGTCGATG CGCTGGTGAG TGTCGTCAGG
AGACTGGCGG CGCGGCGTTG A
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| Protein sequence | MTIPTPTVNP GLAGGDAHAL PHAPLPAGLP DPATLARLAS EFFATPPGQA TAPGLSAGSG
AVGGVPSALP AAAPILASVS NPVPGGSPLA GPGGAGTGVP GLALPQGKVP GANLAPSAPT
HVLSLGNRAP ALAPHAAAQN GLPDNVVSIA PALEPRVGGA ALGVPQVNAP APEGAAKASP
YYFTDGSLQG WQGTPQDIVV PSNGLVSPEA FGLPGDDALR ALLAVQRDVP VSSASGADVP
RYFIDDSHAA EPQGQLYRGT HPPFDVNAIR RDFPILQERV NGKQLVWFDN AATTHKPQAV
IDRLAYFYAH ENSNIHRAAH ALAGRATDAY EHARETVQRF IGASSPDEIV FVRGTTEAIN
MIAKTWGVQN VGEGDEIVVS HLEHHANIVP WQQLAALKGA KLRVIPVDDS GQVLLDEYRK
LLNDRTKIVS VTQVSNALGT VVPVKEIVEL AHRAGAKALV DGAQSISHMR VDVQALDADF
FVFSGHKIYG PTGIGVVYGK RAILDDMPPW QGGGNMIADV TFERTVFQPP PNRFEAGTGN
IADAVGLGAA LDYVNRVGIE NIARYEHDLL AYATSVLAPV PGVRLVGTAR DKASVLSFVL
KGYETEEVGQ ALNEEGIAVR SGHHCAQPIL RRFGLEATVR PSLAFYNTCD EVDALVSVVR
RLAARR
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