| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3986 |
|---|
| Symbol | |
|---|
| ID | 6126819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | - |
|---|
| Start bp | 920741 |
|---|
| End bp | 921541 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 641651094 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_001777627 |
|---|
| Protein GI | 170736367 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.152676 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGC TGACGATCGA ATACGGCGTG CCGCCCGCAC GCCGGCATGC GGCACGTGCG
GCGCCGCGCA CGGTGGCGGC GGTTGCGCGG CCGCCGTCGC TGCCGCCGTC CGCGCAGGTC
GACGCACGGG CCGCACCGGC GAACGGATGG CGTGGCGCGG CGGCGATTGC GCTGGCGATC
GCGGCGCTGC ATGCGGGCGT CGTGCTGCTG GCTGCGCGCG TGCCTGCCGC ACCGCCCGTG
CAGCCGCCGC GGCCGCTGCC GATGACGGTC GAGCTGACGC GGCCGCCCGA ACCGCTGCCG
CAGGCCGCGC ATCCGCCGCC GCCGGTCGTG CCGCCGAAGC CGTTGAAGCA GGCGCCGACC
CCGCCGAAGC CGCGCGCGGC CGTACCGCGT CCGGCGCCGG CTGCCACGCC GCAGGCGACG
CGCGAAGCCG CACCTGCACC CGTGACGGCG ACGCCGGCCG TCGCCGCGCC CGCTGCTCCG
GTTCAGGCGC CCGCACCCGC ACCTGCCGCA CCGGTGCGCG AAACCGCGCC GATCGGCGAC
GCGGCGTACC TGCGCAACCC GGCGCCCGAC TATCCGGCGT TCGCGCAGGA CCAGGGCTGG
GAAGGGCGCG TCGTGCTGCG CGTGCACGTG CTCGCGAGCG GCACGCCCGA TTCGGTCGAG
GTCCGCACGA GCAGCGGCCG CCGGCTGCTC GACAGCGCGG CCGTGGCCGC CGTGAAGCGC
TGGACCTTCG TGCCCGCGAA GCGCGGCGAC GAAGCGGTCG ACGGCTGGGT CAACGTGCCG
ATCGATTTCA AGCTGGGCTG A
|
|---|
| Protein sequence | MTGLTIEYGV PPARRHAARA APRTVAAVAR PPSLPPSAQV DARAAPANGW RGAAAIALAI
AALHAGVVLL AARVPAAPPV QPPRPLPMTV ELTRPPEPLP QAAHPPPPVV PPKPLKQAPT
PPKPRAAVPR PAPAATPQAT REAAPAPVTA TPAVAAPAAP VQAPAPAPAA PVRETAPIGD
AAYLRNPAPD YPAFAQDQGW EGRVVLRVHV LASGTPDSVE VRTSSGRRLL DSAAVAAVKR
WTFVPAKRGD EAVDGWVNVP IDFKLG
|
|---|
| |