Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3978 |
Symbol | |
ID | 6126811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 911116 |
End bp | 912423 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641651086 |
Product | major facilitator transporter |
Protein accession | YP_001777619 |
Protein GI | 170736359 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0632064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCA CCGCCCCGCA GTTGCACGCC GCGACGATGC GGCGCCTGAA CCTGCGCCTG ATTCCGTTCC TGATGCTGCT GTACCTCGTC GCGTATATCG ACCGCTCGAA CATCTCGGTC GCGGCGTTGC AGATGAACGC CGACCTCGGC CTCAGCGCCG AAATGTACGG GCTCGGCGCG GGGCTGTTCT ACGTGACCTA CATCCTGTTC GAGGTGCCGA GCAACCTGTT CCTCGCGCGG GTCGGCGCAC GCCGCTGGAT CGCGCGGATC ATGATCACGT GGGGCATCGT CGCTGCCGCG ATGAGCGCGG TGCAGACACC GGGGCAGCTC TACGCGATGC GCCTGCTGCT CGGCGCGGCC GAAGCCGGCT TCACGCCGGG CATCATCTAC TACCTGTCCG CGTGGTATCC GCAGAGCGAC CGGGCGCGTG CGATGTCGTT CTTTTATATC GGCGCGACGC TCGCGTCGGT GATCGGGCTG CCGCTGTCCG GCGCGCTGCT GAACCTGAAC GGCGTGCTCG GCGTCGAGGG CTGGCGCTGG CTGTTCCTGC TCGAAGGCGT GCCCGCGCTG CTGCTCGGGT TCGTCGTGCT GCGCCGCCTG CCCGATACGC CGGCGCACGC GCGCTGGCTG CCGGCCGACG AGCGCGCGTG GCTCGAAGCG ACGCTGCGCG ACGGCGCGCC GCGCGAGCAT CTGTCGCATG GCGTCGCATT GCGGCGTGCG TTCGGCGACG GCAAGGTGTG GGCGCTCGCC GCGTTCTGGT TGTTGCAGGC GTTCGGCACG ATCGGCCTGA CGTTGTTCCT GCCGCTGCTC GTGAAGAGCC TGTCGGGGCA GTCGAGTTTC GCGGTCGGCA GCCTGTCCGC GCTGCCGTTC CTGTTCGCAT GCGTCGCGAT GTATCTAAAT GGCCGGCATT CGGATCTCGG CGGCGAACGC GCGCTGCATC TCGGCGTGCC GATGCTGTTG GCCGGTGCGT TGCTGGTCGC GGCGATCTAC ACGCCGGTGC TGCCCGTCGC GTATGCGCTG CTGGTATTCG CGGTCGGCTT GAATTGGGCG GCGACGCCGG TGTTCTGGGC CGTGACGACC GAATACGTGT CGGGCCTCAC GGCGGCCGCG TCGATCGCGC TGATCAACGC GGTCGCGAAC ATCGCGGGGC TCGCGCTGCC GCCGGTGATG GGGCGGATCA AGGACGTCAC GCATTCGTAC GATCTCGCGC TGCTGCTCGT CGCGGTCGCG TTGCTGGCGG GCGGTGTGCT CGCGTTGCGG ATCGCGTCGC GGCGCGCGAT GCCGGTGGTG GCAGGGCGGG TGGGGTGA
|
Protein sequence | MTATAPQLHA ATMRRLNLRL IPFLMLLYLV AYIDRSNISV AALQMNADLG LSAEMYGLGA GLFYVTYILF EVPSNLFLAR VGARRWIARI MITWGIVAAA MSAVQTPGQL YAMRLLLGAA EAGFTPGIIY YLSAWYPQSD RARAMSFFYI GATLASVIGL PLSGALLNLN GVLGVEGWRW LFLLEGVPAL LLGFVVLRRL PDTPAHARWL PADERAWLEA TLRDGAPREH LSHGVALRRA FGDGKVWALA AFWLLQAFGT IGLTLFLPLL VKSLSGQSSF AVGSLSALPF LFACVAMYLN GRHSDLGGER ALHLGVPMLL AGALLVAAIY TPVLPVAYAL LVFAVGLNWA ATPVFWAVTT EYVSGLTAAA SIALINAVAN IAGLALPPVM GRIKDVTHSY DLALLLVAVA LLAGGVLALR IASRRAMPVV AGRVG
|
| |