Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3923 |
Symbol | |
ID | 6126756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 849087 |
End bp | 851105 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641651031 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001777564 |
Protein GI | 170736304 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.379246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CGATCCATGC GTGGATCGGC GCGATCGGCG CGCATCCGCT GCTCGTGCTG GCGATCGTGT TCGTGGCCGC CTGCGCCGAG GCGATCGCGC TGGTCGGCAC GATCGTGCCG GCCGGTGCCG TGATGTTCGC GGCCGGCGCG CTGATCGGCG CGGGTGCGCT CGACGCATGG GCGACGATCG GCGTCGCGGC CGTCGGCGCG GTGATCGGCG ACGGGATCAG CTACGAACTC GGCCGGCATT ACCGCGGGAT GATCCGCAAC GCGTGGGCGC GCTTCGGCTA TGCGAGCGCC TACGCGCGCG GCGAGGAATT CGTGCTGCGT CACGGCATGA AGAGCATCGT GCTCGCGCGC TTTCTCGCGC CGGTGCGGGC GGTCGTGCCG GTCGTCGTCG GCTGCGCGAC GCTGCCGCGC CGGTCGTTCT ATCCGGTCAA CGTGATCTCC GCGCTCGTGT GGGCGCCCGT GCACGTCGGG CCCGGCATCC TGTTCGGCGC GTCGGCCGCG CTGGCCGCGG CGATCAGCGT GCGGGTCGCC GCGATCCTGC TGGTCGTGGC CGGGCTGGTC GCGCTCGTGT GGATCGGCGT GCGCGTCGCG CTGCGGCGCG GCTGGCCGTT GCTGCGCCGC GCGCTCGTCG AAACCGTGCA TGCATGCGCG CGCCGCTGGC CGCGATTCGG CGCGCGGCTG CACGACGGGA TCGCGTACTT GCGCGGGCTG CCCGGCGCGG TGCCCGTGCT CGCGCTGCTG TTCATCGGCT GCGTGTGGCT GTTCGCGGGG ATCGTGCAGG ACGTCGTCGC GAACGATCCG CTGATGCACG CGGACATTGC GCTGTACGCG TTCCTGCAGA ACCTGCGCAC GCCACCCGGC GACGCCGTGA TGAGCGCGCT CGCCGTGCTG CATGGGCACG ACACGGGGCT GATCGTCGCG GCCGCGTTCC TCGTGTGGCT GATGATCCAT CGCTGCTGGC TGACGGCTGC CTGGTGGCTC GCGACGATCG GCGTCGCCGT TGCGCTCGTG CCGGTGTTCG GCGCGAGCGT GCCCGGCGCG ACGCCCGCGA GCCTGCCGCC CGGCGCGCTG CACGTGGCGC TGCCCGATGC CGACGCCGCG TTCGCGATCC TCGCGAGCAG CGGCCTCGGC TGGGCGCTCA CGCGCGACCG GCCCGCGCTG TGGCGCATAC CGGTCGTGAC GGCGGTCGTG CTGTGGATCG TGCTCGGCGG CTTAGCGCGA CTGTACGTCG GCGATACCTG GTTGTCGGGT CTGCTGGGCG GATGGAGTCT CGGGCTCGCG TGGTTCGCGT TGCTCGCCGG CGCCTATGCG TACTGGCGTG TGCGCGAGCA CGTACAGCCC AGAGGCGCGC TCGTCGCGGT CGTCGTCGTG CTCGCGACGG CCGGTGTATG GACAGTTCCC GCGCAGTGGC AGCGCGATCG CGCGGCGCGT CCGCATGTCG GCGACGTGGT CGCGATGACC GTCGACCAGT GGCTGCGCGG CGGGTGGCAG CGCGTGCCGA CGCGGCGCAC CGAGATCGGC GGCGACCGTG AGGAATTTCT GCCGCTGCAA TGGAGCGCGA CGTCGGACAC GCTCGACCGT CATCTCGCGC AGGCCGGCTG GCAGCGGGCG ACGCCGTGGA CGCCGGCCAC CGCGCTGCGC TGGCTGTTGC CGCAGGCGGC GGCCGATACG CTGCCGGTGC TGCCGCGCTA TACGCATGGT GAAAGCACGC GGCGTGTGTT CGTTCGCGTC GATCCGGCGC ACCCGGAAAG CCGCTTCGTG CTGCGGTTGT GGCGCTATCC GTACGTGTTG CAGGATGCGC TCGGCATGCG GCCGTTGTGG TACGGCGCGC TGTATCGTGA GACGCTGCGC CGGCCGGCGC GGCTGATGAC GTTCGTGCGC TCGACGACGA TCGACGATGC GGCGGCGATC GCACACGCGC TGGCGGTGGA GCCGACGATC GCGCATCCGC CAGCGGGGAT GGCGGCCGCG CCGGACGCGA TGCTGCTCGT GTGGATGGTC CAGCCGTGA
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Protein sequence | MSDTIHAWIG AIGAHPLLVL AIVFVAACAE AIALVGTIVP AGAVMFAAGA LIGAGALDAW ATIGVAAVGA VIGDGISYEL GRHYRGMIRN AWARFGYASA YARGEEFVLR HGMKSIVLAR FLAPVRAVVP VVVGCATLPR RSFYPVNVIS ALVWAPVHVG PGILFGASAA LAAAISVRVA AILLVVAGLV ALVWIGVRVA LRRGWPLLRR ALVETVHACA RRWPRFGARL HDGIAYLRGL PGAVPVLALL FIGCVWLFAG IVQDVVANDP LMHADIALYA FLQNLRTPPG DAVMSALAVL HGHDTGLIVA AAFLVWLMIH RCWLTAAWWL ATIGVAVALV PVFGASVPGA TPASLPPGAL HVALPDADAA FAILASSGLG WALTRDRPAL WRIPVVTAVV LWIVLGGLAR LYVGDTWLSG LLGGWSLGLA WFALLAGAYA YWRVREHVQP RGALVAVVVV LATAGVWTVP AQWQRDRAAR PHVGDVVAMT VDQWLRGGWQ RVPTRRTEIG GDREEFLPLQ WSATSDTLDR HLAQAGWQRA TPWTPATALR WLLPQAAADT LPVLPRYTHG ESTRRVFVRV DPAHPESRFV LRLWRYPYVL QDALGMRPLW YGALYRETLR RPARLMTFVR STTIDDAAAI AHALAVEPTI AHPPAGMAAA PDAMLLVWMV QP
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