| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3905 |
|---|
| Symbol | |
|---|
| ID | 6126738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 831997 |
|---|
| End bp | 833190 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641651013 |
|---|
| Product | acyl-CoA dehydrogenase type 2 |
|---|
| Protein accession | YP_001777546 |
|---|
| Protein GI | 170736286 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.936592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAG CCGCTCTCGC CATCGAATCC GCGCCGACCT CGCCGCCCGC GGCCAGTCCC
GCGGCCGGGC AGTTGTCGCC GCTCGACGCG GTGATCGAAA CCGTCGCCGC GCGCCGCGAG
GAATTCGACC GGCTGTCGCA CGTGCCGCGC GACGTGATCG CGCTGTTCAA GCAGGCCGGC
ATCTATCGCG CAGGCACGCC GCGCCGCTTC GGCGGCGATG CGCTCGCGCC GACCGCGTTC
CTCGACATGA TCGAACGGAT CGCGACCGCC GACGGCTCGG CCGCATGGGT CGCGAGCTTC
GGCTCCGCGA ACGTCTACCT CGCCGCGCTG CCGCTCGACA CGCAGGCCGA GTTGTACGCG
AGCGGCCCCG ACCAGGTGTT CGCGGGCGGC CTGTTCCCGG TGCAGCCCGC GCAGGACGCG
CCGGGCGGCT GGCGCGTGAA CGGCACGTGG AAATTCGCGA GCGGCTGCAA GGGCGCAGAC
TGGCTCGGCG TCGGCATCGC CGTGCCGGGC GCGCAGGACG CCGCGCCGAA CAAGCCGCGC
ACGGCCGTGT TCCGCGCCGC CGACGTCGAG ATCGTCGAGA ACTGGAGCGT GGTCGGCATG
CAGGGCACCG GCAGCCACGA CCTGCGCGTG AACGACCGTT TCGTGCCCGA GGCGTGGACC
TTCGTGCGCG GCGGCGAACC GACCGTCGAC GAGCCGCTTT ACCGCTATCC GACCGTCGCG
TATGCGGCGC AGGTGCTGGC CGTCGTCAAC CTCGGCCTCG CGCGTGCGGC GCTCGACGTC
GTGAACCGCA TGTCGGGCGG CCGCCAGACG ACGACCGGCG CGCCGCGCCT CGCCGATCGC
GCGTATTTCC GCATCGAGCT CGCGAAGGCC GAAGCGCAAC TGCGTTCGGC GCGTGCGTTC
TTCTACGACG CGACCGACTC GGTCTGGCAA TCGATCCTCG CCGGCAATCC GGTCACGCCC
GATCAGGTCA GCCTGCTGCG GCTCGCGGCC ACGCAGATCG CCCGCGAAGG CGCGAGCGTC
GTCGAACGCG CGTATCGCCT CGGCGGCACG GCGGCGATCT ATCGGTCGCA TCCGCTGCAG
CGGTTGCTGC GCGATGCGAT GGTCGTCACG CAACACGCGT TCCTCGCCGA GGGCAACTTC
GACGGCGCGG GCGCGGTGTT CACCGGCGTC ACGCCGTTTC CGGGCTACCT GTAA
|
|---|
| Protein sequence | MPQAALAIES APTSPPAASP AAGQLSPLDA VIETVAARRE EFDRLSHVPR DVIALFKQAG
IYRAGTPRRF GGDALAPTAF LDMIERIATA DGSAAWVASF GSANVYLAAL PLDTQAELYA
SGPDQVFAGG LFPVQPAQDA PGGWRVNGTW KFASGCKGAD WLGVGIAVPG AQDAAPNKPR
TAVFRAADVE IVENWSVVGM QGTGSHDLRV NDRFVPEAWT FVRGGEPTVD EPLYRYPTVA
YAAQVLAVVN LGLARAALDV VNRMSGGRQT TTGAPRLADR AYFRIELAKA EAQLRSARAF
FYDATDSVWQ SILAGNPVTP DQVSLLRLAA TQIAREGASV VERAYRLGGT AAIYRSHPLQ
RLLRDAMVVT QHAFLAEGNF DGAGAVFTGV TPFPGYL
|
|---|
| |