Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3790 |
Symbol | |
ID | 6126623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 706235 |
End bp | 707590 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641650897 |
Product | polyhydroxyalkanoate depolymerase, intracellular |
Protein accession | YP_001777431 |
Protein GI | 170736171 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.595615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0255913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGC TTGCCTATCC GTTTTATCAA TGGTCTGCGG AATGCCTGCG CCCGGCGCGT GCCTGGGCGG CCGCGACGCG CGCGACGATG TCGCTGTGGC CGCCGGCGAC TTCGACGCCG ACGGGCCGCA TGGTCGACGC GCTGTGCGAA CTGCTCGAAT GCTGCGCGTT CTCGCACCGG CGGCCGCCGT TCGGCATCGC GTCGGTCGTC GTCGACGGCG AAACGGTGCC GATCGTCGAG GAAGCCGCGA CGACCACGCC GTTCGGGACG CTGCTGCATT TCCGCAAGGC CCGGCCGGTC GCGCGCCAGC CGCGCGTGCT GATCGTCGCG CCGATGTCCG GGCACTTCGC GACGCTGCTG CGCGGCACGG TACGCACGAT GCTGGCCGAC CACGACGTGT ACATCACCGA CTGGCACAAC CCGCGCGACA TCCCGCTGGC GGCCGGACGC TTCGGTTTCG ACGAGTACGT CACGCACGTA ATCGACTTCA TCCGCCATAT CGGCCCGGAC GCGCACGTGC TGGCGATTTG CCAGCCGACC GTCGCGTCGC TGGCGGCAGT GTCGCTGATG GCGGCCGGCG GCGATCCGGC CCAACCCGCG AGCCTCACGC TGATGGCCGG CCCGATCGAC TGCCGCGTGA ATCCGACGAA GGTCAACGAA CTCGCGACGA GCCAGCCGAT CGAATGGTTC GCGCGCAACC TGATCAGCGT GGTGCCGACG GGTTTCGTCG GCGCGCAGCG GTGCGTGTAT CCGGGCTTCG TGCAGGTCGG CGCGTTCATG TCGATGAACC CGGACCGGCA TGCGGCGTCG TTCGCCGATC TGTACTACGA ACGCGCGAAA GGCGACCCCG CGAAAGCCGA TACGTTGCGG CACTTCTACG ACGAATATTT CGCGACGGCC GATCTCACCG CGGAGTTCTA TCTGGAAACG GTCGAGAAGG TGTTCCAGCA GTACGCGCTC GCGCGCGGCG AACTGGCGGT GGGCGACACG CTCGTCGAAC CGGCGGCGAT TCATCGCACC GCGCTGTTGA CGATCGAAGG CGAGAAGGAC GACATCTGCG CGGTGGGCCA GACGGTGGCC GCGCAGGAAC TGTGTTCGGG GTTGCCGTCG TACCTGAAGA CGCACCATGT ACAGACGGGT GTGGGGCACT ACGGCGTGTT CAACGGTAGC CGGTGGGAAA CGCAGATCTA TCCGATCGTG CGGGCGACGA TCCACGACAA CGAGCCGTAC GATCGCACCG CGGATGCGCA AGGCGACACC AGCGGCACTC ACTACGTCAC GCTGCGTGCG CTGCTCGATG CGCGCGCAGC CGCGATCGAT GCGGCGACCG AAGCGCAATC GGATCACGCG CACTGA
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Protein sequence | MNLLAYPFYQ WSAECLRPAR AWAAATRATM SLWPPATSTP TGRMVDALCE LLECCAFSHR RPPFGIASVV VDGETVPIVE EAATTTPFGT LLHFRKARPV ARQPRVLIVA PMSGHFATLL RGTVRTMLAD HDVYITDWHN PRDIPLAAGR FGFDEYVTHV IDFIRHIGPD AHVLAICQPT VASLAAVSLM AAGGDPAQPA SLTLMAGPID CRVNPTKVNE LATSQPIEWF ARNLISVVPT GFVGAQRCVY PGFVQVGAFM SMNPDRHAAS FADLYYERAK GDPAKADTLR HFYDEYFATA DLTAEFYLET VEKVFQQYAL ARGELAVGDT LVEPAAIHRT ALLTIEGEKD DICAVGQTVA AQELCSGLPS YLKTHHVQTG VGHYGVFNGS RWETQIYPIV RATIHDNEPY DRTADAQGDT SGTHYVTLRA LLDARAAAID AATEAQSDHA H
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