Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3780 |
Symbol | |
ID | 6126613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 693259 |
End bp | 694170 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641650887 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001777421 |
Protein GI | 170736161 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.116323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000992163 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCATCA CGCCTCTCCC GCCCCTGCAG TGCCTCGTCG CGTTCGAAGC CGCCGTGCGG CACGCGAGTT TCACGAAAGC CGCCGCCGAA CTGCACCTGA CCCAAAGCGC GATCAGCCGC CAGATCCAGC AACTCGAGGA ATTCCTCGGC CGCTCGCTGT TCGTGCGCGA GCACCGTTCG CTGCGGCTGA CGATCGCCGG CGAGCAATAC GCGGCGCAGG TCCACCATCT GCTCACGCAA TGCGCGGAAG CCACCCACGA CGTGATGAAA CCGTACGGCG ATCTCGAACT GACGATCGCG TGCTCGTCCG GCGTCGCGGT GCTGTGGCTC ACACCGCGGC TACCGGACTT TCGCGCCACG TATCCCAACA TCAAGCTGCG CCTGATCGTG CGCGACGGCC TGGCATCGAT GTCGCCCGCG GAATTCGACG TCGGCGTCTA CTACGTGCGC CAGCAGGCGC CGGCCGAATA CACCGCACGC CGGCTGTTCG ACGAGGAAGT GTTCCCCGTC TGCGCGCCCG GCTATCTCGC CGGCCGCACG CTCGACGCGG CCGATCTCGC GAACGAAACG CTGCTGCGCC TCGAAGACGG CCAGCGTCAA TGGATGTCGT GGTCCGAATG GTTCGACCTG AACGACGTCG ACCGGCAGAA GGCGCAGCCG CAGGACATCA CGATCAACTC CTATCCGCAG ATCGTGCAGA TGACGATTCT CGGTCAGGGC GTGTCGCTCG GCTGGCGCTA CATGATCGAC GCCTGCATCG ACGCCGGCCT GCTCGTGCGC GTGACGGAAG CGTCCGCGAG CCACGGCGGC GGCTATTACG TGATCTCGCC GAACGACCGC GCGCAGAACC AGGCCGCCCG CCTGTTCACC CGCTGGCTGT TCGAACAGGC AGAGCAGCAA ACCGGGGCCT GA
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Protein sequence | MRITPLPPLQ CLVAFEAAVR HASFTKAAAE LHLTQSAISR QIQQLEEFLG RSLFVREHRS LRLTIAGEQY AAQVHHLLTQ CAEATHDVMK PYGDLELTIA CSSGVAVLWL TPRLPDFRAT YPNIKLRLIV RDGLASMSPA EFDVGVYYVR QQAPAEYTAR RLFDEEVFPV CAPGYLAGRT LDAADLANET LLRLEDGQRQ WMSWSEWFDL NDVDRQKAQP QDITINSYPQ IVQMTILGQG VSLGWRYMID ACIDAGLLVR VTEASASHGG GYYVISPNDR AQNQAARLFT RWLFEQAEQQ TGA
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