Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3633 |
Symbol | |
ID | 6126467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 528682 |
End bp | 530112 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641650740 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001777275 |
Protein GI | 170736015 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTGC TTATTCTTCC CCTCGTCCTC GCGCTGTCGG CCTGCTCGCT GGCGCCCACG CTGGTCAAAC CGTCGATGCC GGTGCCGACG GCCTACACCG CCGCCGCTGC CGCCAATCCC GACGCGAACG CCGCCGACCT CGGCTGGCGC ACGATGTTCG GCGACCGCCG CCTGCAACGC CTGATCGAGC TCGCGCTCGA GCACAACCGC GACCTGCGCG TGGCCGCGCT GAACGTCGAG GCCGCCGAAG CGCAGTACGG CATCCAGCGT GCCGCGCGCC TGCCGTCGAT CGGCGCCGGC GCGAGCTTCA CGCGTCAGCG TACGTCGGAC GACACGCAGT CGAATCCGCC GCTGTTCGGC GCGACGCAGA ACCAGTACGG CGTCAACGTC GGCATCAGCG CGTTCGAGAT CGACCTGTTC GGCCGCGTGA AATCGATGTC GGATGCGGCG TTCGCGCGCT ACCTCGCGAC CGATCACGGC CGCCGCGCGG TGCAGATCTC GCTCGTCGGC GGCGTGGCGG ACGCGTACTT CGCGGAACGC CTCGCGCACG AGCAACGCCA GTTGTCCGAA CGCACGCTCG CCGACTGGCA GCAGTCGCTC GATCTCGCAC GCCGCCTGAA GGAAGCGCAT CAGGCGAGCG GCGTCGACAT CGCGCAGGCC GAAGGCCAGG TCGCGAGCGC GACGGCCGAT CTCGAAGCGC GCACGCGCGC CGTCGAGCAG GCACGCAATG CATTGCGCCT GCTGATCGGC ACCGAGCTGC CGAAGGATCT GCCCGAGCCG CTGCCGCTTC AGCAGCAACC GGTGATGACG CAACTGCCGG CCGGCTTGCC GTCCGAACTG CTGTTCCGTC GCCCGGATAT CCAGCAGGCC GAACAAAATC TCGTCGCCGC GAATGCGGAC ATCGGCGCCG CGCGCGCCGC GTTCTTCCCG CGCCTGTCGC TGACGTCGTC GATCGGCTTC CTCAGCCCCG CGATGGGCAG CCTGTTCGAC GGCGGCCAGC GCGCATGGAG CTTCGCGCCG CAGGTCACGG TGCCGATCTT CCAGGGCGGG CGGCTGCGTG CCGAGCTGCG TCTCGCGGAA GTGCGCAAGT CCAGCGCGGT CGCCGAGTAC GAACGCGCGA TCCAGGCCGC GTTCCGCGAA GTGGCCGACG GCATCGCCGG ACGTGAAACC TTCGGCCGTC AGATCGAAGC CCAAACGCGC GTGGTCGGCT CGGCCGAACG CCGCGCCGAC CTGTCGAACC TGCGTTATCG CGCGGGTGTC GAGGGGCGGC TGGAGCTGCT CGATTCGCAG CGGCAGCTCT ATGCGGCACG ACAGGCGCTG CTCGATCTGC GCCGCAGCGA GCTCGGCAAT GCCGTCGCGC TGTACAAGGC GCTCGGCGGC GGCCTGACGG ACCAGGACGT CGCACCGTCG AAGCGCGTGA TGCAGAACTG A
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Protein sequence | MRLLILPLVL ALSACSLAPT LVKPSMPVPT AYTAAAAANP DANAADLGWR TMFGDRRLQR LIELALEHNR DLRVAALNVE AAEAQYGIQR AARLPSIGAG ASFTRQRTSD DTQSNPPLFG ATQNQYGVNV GISAFEIDLF GRVKSMSDAA FARYLATDHG RRAVQISLVG GVADAYFAER LAHEQRQLSE RTLADWQQSL DLARRLKEAH QASGVDIAQA EGQVASATAD LEARTRAVEQ ARNALRLLIG TELPKDLPEP LPLQQQPVMT QLPAGLPSEL LFRRPDIQQA EQNLVAANAD IGAARAAFFP RLSLTSSIGF LSPAMGSLFD GGQRAWSFAP QVTVPIFQGG RLRAELRLAE VRKSSAVAEY ERAIQAAFRE VADGIAGRET FGRQIEAQTR VVGSAERRAD LSNLRYRAGV EGRLELLDSQ RQLYAARQAL LDLRRSELGN AVALYKALGG GLTDQDVAPS KRVMQN
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