Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3591 |
Symbol | sdhB |
ID | 6126425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 476190 |
End bp | 476891 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641650698 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001777233 |
Protein GI | 170735973 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.130742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC GCATTTTTGA AGTCTACCGC TACGATCCGG ACAAGGACGC AGCGCCGCGC ATGCAGACGT ACGAGCTCGA GATCCAGCAT GAACGCATGC TGCTCGACGC GCTGGTCAAG CTGAAGGCAC TGGACGAGAC GCTGTCGTTC CGCCGCTCGT GCCGTGAAGG CGTGTGCGGT TCGGACGCGA TGAACATCAA CGGCAAGAAC GGTCTCGCGT GCCTGACGAA CCTGAACGAC CTGCCGCAGA AGATCGTGCT GCGTCCGCTG CCGGGCCTGC CGGTCGTGCG CGACCTGATC GTCGACATGA CGCACTTCTT CAACCAGTAC CACTCGATCA AGCCGTACCT GATCAACGAC GCGCCGCCGC CGGAGAAGGA ACGCCTCCAG TCGCCGGAAG AGCGCGACGA GCTCGACGGC GTGTACGAGT GCATTCTGTG CGCGAGCTGC TCGACGTCGT GCCCGAGCTT CTGGTGGAAC CCCGACAAGT TCGTCGGCCC GGCCGGCCTG CTGCAGGCTT ACCGCTTCAT CGCGGACAGC CGCGACACCG CCACCGGCGA GCGTCTCGAC AACCTGGAAG ACCCGTACCG TCTGTTCCGT TGCCACACGA TCATGAACTG CGTCGACGTT TGCCCGAAGG GCCTGAACCC GACGAAGGCG ATCGGCAAGA TCAAGGAACT GATGGTTCGT CGCGCGGTAT AA
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Protein sequence | MAKRIFEVYR YDPDKDAAPR MQTYELEIQH ERMLLDALVK LKALDETLSF RRSCREGVCG SDAMNINGKN GLACLTNLND LPQKIVLRPL PGLPVVRDLI VDMTHFFNQY HSIKPYLIND APPPEKERLQ SPEERDELDG VYECILCASC STSCPSFWWN PDKFVGPAGL LQAYRFIADS RDTATGERLD NLEDPYRLFR CHTIMNCVDV CPKGLNPTKA IGKIKELMVR RAV
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