Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3515 |
Symbol | |
ID | 6126350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 389940 |
End bp | 392120 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641650623 |
Product | ornithine decarboxylase |
Protein accession | YP_001777158 |
Protein GI | 170735898 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.207065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGT TGAAAATCGC AGTCGAGCCG GCGCTGATCG GCGCCTTTCT CACCACGCAT GAACAGGTCG ACGTATTTCA GACCGATTTC ACGAATATCG CGGCCATCGT CGTCGGCATC GATGCCGCGG AAAAGGTGCT GAAAACCGTC GAGAGAACCG GTTTCGCGAT TCCGTTCTTC GTCGCGGTCG AGCCCGACCA GGAAGTGCCG CCGTCGGTCC TGCCGCGCGC GAGCGGCGTG ATCCAGCTCC GGCACGGCGG CCGCCATTAC TACGGCCGGC AGATTTCCGC CGCCGCCGAC ATCTACAGCG AGAACCTGCT GCCGCCGTTC TTCAAGGTCA TGCGCGACTA CGTGCAGCGC GGCTACGTCG AATTCGACTG CCCGGGCCAC CAGGGCGGCC AGTTCTTCTC GAACCATCCG CTCGGCCGGA TGTTCTTCGA CTTCTTCGGC GAAACGTTGT TTCGCGCGGA CCTCTGCAAC GCGGACGTCC GGCTCGGCGA CCTGCTGATC CACGAAGGGC CCGCGCTGGA AGCGCAGCGC AACGCCGCAC GGATCTACAA CGCGGACAAG ACCTGGTTCG TACTGAACGG CACGTCGACG TCGAACAAGG TCGTCACGAG CGCGCTGCTC GCGCCCGACG ATCTCGTGCT GTTCGACCGC AACAATCACA AGTCGGTGCA CCTCGGCGCG CTCGTGCTGT CCGGCGCGCG GCCGGTCTAC CTCGAGACCG CGCGCAACGC GTGGGGCCTC ATCGGCGGCG TCGACAGCGC GGCGCTCGGC GAAGCGCGCA TTCGCGACGC GATCCGCGAC GTCGCGCCCG AGCGCGCCGA CCTGCCGCGC CCGTTCCGGC TCGCGGTGAT CCAGCTCGGC ACCTACGACG GCACGATCTA CAACGCACGC GAAATCGTCG ACCGGATCGG GCATCTGTGC GACTACATCC TGTTCGATTC GGCGTGGGTC GGCTACGAGC AGTTCATTCC GATGATGCAG GACTGCTCGC CGCTGATGCT CACGCTCGGC CCCGACGATC CCGGCATCTT CGTCACGCAG TCGGTGCACA AGCAACAGGC CGGCTTCTCG CAGACGTCGC AGATCCACAA GAAGGATCGC CACATCGAAG GCCAGAAGCG TTTCTGCGAT CACCGGCGCT TCAACAACGC GTACATGATC CACGCGTCGA CGAGCCCGTT CTACCCGATG TTCGCGGCGC TCGACGTCAA CGCGCAGATG CATGCGGGCC CGGCCGGCAG GCGCCTGTGG CGCGACTGCG TGGCACACGG CGTCGATGCG CGCAAGCTGC TGCTGAAAAC GTGCCGGCAG ATCCGTCCGT TCGTCCCGCA AGAGATCGAC GGCCGCCCGT GGGCCGACTA TCCGACCGAG CAGATCGTCG ACGACCTGCG CTTCTTCCGC TTCCATCCGG CCGACACGTG GCACGGCTTC GAAGGCTATG CGGACGACCA GTATTTCGTC GATCCGTGCA AGCTGCTGCT GACCACGCCC GGTATCGATC GCGACACGCA CGAATACGCG CCGTTCGGCG CGCCGGCGCC GATCCTCGCG CGCTACCTGC GCGAGCACGG CGTCGTGCCC GAGAAGGCCG ACCTGTACAC GATCCTGTTC CTGCTCACGC CGTCGGAGAG CTTCGGCAAG TTGCAGCATC TGGTCGCGCA CCTCGCGCAG TTCGAGCGCC ATCTCGACCA GGACACGCCG CTGCGCGAAG CGATTCCGTC GCTGTGCGAA GCGTATCCGG AGCTGTACGG CACGATGCGC CTGCGGCAGC TGTGCCAGCG CATGCACGAC TTCTACCGTA GCCACGACAT GAAGCACCTG CAGAAACAGA TGTTCCGGCG CGCGCAGTTC CCCAAGCAGG CGATGCTGCC GCAGGCCGCG AATGCCGAGC TGATCCGCAA CAACGTCGAG CTCGTCACGC TCGAGCGCAT CGAAGGCCGG ATCGCGACCG AAGGCGCGCT GCCCTATCCG CCCGGCATCT TCTGCGTGGT GCCCGGCGAA GCGTGGGGCG GCCCGGCGCT CGACTACTTC CGCGCGCTCG AAGCCGGGAT CAACGCACTG CCGGGCTTCG AGCCGGAAAT CCAGGGCGTG TACCTGCAGA CGAAGCCGGA CGGCACGAAG CAGGCGTCGG CCTACGTGGT CGCGGCCGGC GCGGACGCGT CGCGCATGTA A
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Protein sequence | MSLLKIAVEP ALIGAFLTTH EQVDVFQTDF TNIAAIVVGI DAAEKVLKTV ERTGFAIPFF VAVEPDQEVP PSVLPRASGV IQLRHGGRHY YGRQISAAAD IYSENLLPPF FKVMRDYVQR GYVEFDCPGH QGGQFFSNHP LGRMFFDFFG ETLFRADLCN ADVRLGDLLI HEGPALEAQR NAARIYNADK TWFVLNGTST SNKVVTSALL APDDLVLFDR NNHKSVHLGA LVLSGARPVY LETARNAWGL IGGVDSAALG EARIRDAIRD VAPERADLPR PFRLAVIQLG TYDGTIYNAR EIVDRIGHLC DYILFDSAWV GYEQFIPMMQ DCSPLMLTLG PDDPGIFVTQ SVHKQQAGFS QTSQIHKKDR HIEGQKRFCD HRRFNNAYMI HASTSPFYPM FAALDVNAQM HAGPAGRRLW RDCVAHGVDA RKLLLKTCRQ IRPFVPQEID GRPWADYPTE QIVDDLRFFR FHPADTWHGF EGYADDQYFV DPCKLLLTTP GIDRDTHEYA PFGAPAPILA RYLREHGVVP EKADLYTILF LLTPSESFGK LQHLVAHLAQ FERHLDQDTP LREAIPSLCE AYPELYGTMR LRQLCQRMHD FYRSHDMKHL QKQMFRRAQF PKQAMLPQAA NAELIRNNVE LVTLERIEGR IATEGALPYP PGIFCVVPGE AWGGPALDYF RALEAGINAL PGFEPEIQGV YLQTKPDGTK QASAYVVAAG ADASRM
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