Gene Bcenmc03_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3510 
Symbol 
ID6126345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp382989 
End bp383981 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID641650618 
Productaliphatic sulfonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_001777153 
Protein GI170735893 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00263182 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGACA CACCGCACGC AGACCTTGAA ACGACCCCGG CGAACCCGCG CCGCCGCCAG 
TGGCTGCACG GCGCGGCCGC CGGGCTGGCC GGGCTCGCGC TCGGACTGCT CGCGGCCGCA
CCGGCCCGGG CCGACGACAG CGGCACGCGG CTGCGCATCG GCTTCCAGAA ATACGGCAAC
TTCGTCGTGC TCAAGGCGCG CGGCACGCTC GAGAAGCGTC TGGCGAGCCA GGGCGTCACC
GTGCAATGGC TCGAATTCCC GGCCGGCCCG CAACTGCTCG AAGGGCTGAA CGCCGGCGCG
ATCGACGTCG GCACGGTCGG CGAAACCCCG CCGATCTTCG CGCAGGCCGC CGGCGTCGAT
TTCGTCTACA TCGGCAACGA GCCGCCCGCG CCTCGGGGCG AGGCAATCGT CGTGCTGCCC
GATTCGCCGA TCCGCACCCT CGCGCAACTG CGCGGCAAGA AGGTCGCGTT CAACAAGGGC
TCGAACGTCC ATTACCTGCT GGTGAAGGCG CTCGAGCATG CGGGCCTCAC GTATGCCGAC
ATCCAGCCGA TCTATCTGAC GCCGGCCGAC GCGCGCGCCG CGTTCGTGCA GCGCAGCGTC
GATGCGTGGG TGATCTGGGA TCCGTATCTG GCCGCCGCCG AACGGCAGCT CGGCGCGCGC
GTGGTCGCGA ATGGCGAAGG GCTCGTGCGC AACACGCAGT ACTACCTCGC CGCACGCAAG
TACGCGGCCG CCCACCCGCA GGTGCTGCGC GCGCTGCTCG ACGAAGTCGA CTCGGTCGAT
CGCTGGGCGC GCGATCACGT GCCCGAGGTG GCCGCGCAAC TGTCGCCGCT CGTTGGCCTC
GACGCGCCGA CGCTCGAAGT CGCGCTCAAG CGCGCCGGCT ACGGCGTGCA GCCGATCACC
GACGCGACGG TTGCGTACCA GCAGAGCATC GCCGACGCGT TCACCACGCT GAAGCTGATT
CCGGGCAAGC TGTCGGTCGC CAGCGCACGC TGA
 
Protein sequence
MNDTPHADLE TTPANPRRRQ WLHGAAAGLA GLALGLLAAA PARADDSGTR LRIGFQKYGN 
FVVLKARGTL EKRLASQGVT VQWLEFPAGP QLLEGLNAGA IDVGTVGETP PIFAQAAGVD
FVYIGNEPPA PRGEAIVVLP DSPIRTLAQL RGKKVAFNKG SNVHYLLVKA LEHAGLTYAD
IQPIYLTPAD ARAAFVQRSV DAWVIWDPYL AAAERQLGAR VVANGEGLVR NTQYYLAARK
YAAAHPQVLR ALLDEVDSVD RWARDHVPEV AAQLSPLVGL DAPTLEVALK RAGYGVQPIT
DATVAYQQSI ADAFTTLKLI PGKLSVASAR