Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3510 |
Symbol | |
ID | 6126345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 382989 |
End bp | 383981 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641650618 |
Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001777153 |
Protein GI | 170735893 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00263182 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACGACA CACCGCACGC AGACCTTGAA ACGACCCCGG CGAACCCGCG CCGCCGCCAG TGGCTGCACG GCGCGGCCGC CGGGCTGGCC GGGCTCGCGC TCGGACTGCT CGCGGCCGCA CCGGCCCGGG CCGACGACAG CGGCACGCGG CTGCGCATCG GCTTCCAGAA ATACGGCAAC TTCGTCGTGC TCAAGGCGCG CGGCACGCTC GAGAAGCGTC TGGCGAGCCA GGGCGTCACC GTGCAATGGC TCGAATTCCC GGCCGGCCCG CAACTGCTCG AAGGGCTGAA CGCCGGCGCG ATCGACGTCG GCACGGTCGG CGAAACCCCG CCGATCTTCG CGCAGGCCGC CGGCGTCGAT TTCGTCTACA TCGGCAACGA GCCGCCCGCG CCTCGGGGCG AGGCAATCGT CGTGCTGCCC GATTCGCCGA TCCGCACCCT CGCGCAACTG CGCGGCAAGA AGGTCGCGTT CAACAAGGGC TCGAACGTCC ATTACCTGCT GGTGAAGGCG CTCGAGCATG CGGGCCTCAC GTATGCCGAC ATCCAGCCGA TCTATCTGAC GCCGGCCGAC GCGCGCGCCG CGTTCGTGCA GCGCAGCGTC GATGCGTGGG TGATCTGGGA TCCGTATCTG GCCGCCGCCG AACGGCAGCT CGGCGCGCGC GTGGTCGCGA ATGGCGAAGG GCTCGTGCGC AACACGCAGT ACTACCTCGC CGCACGCAAG TACGCGGCCG CCCACCCGCA GGTGCTGCGC GCGCTGCTCG ACGAAGTCGA CTCGGTCGAT CGCTGGGCGC GCGATCACGT GCCCGAGGTG GCCGCGCAAC TGTCGCCGCT CGTTGGCCTC GACGCGCCGA CGCTCGAAGT CGCGCTCAAG CGCGCCGGCT ACGGCGTGCA GCCGATCACC GACGCGACGG TTGCGTACCA GCAGAGCATC GCCGACGCGT TCACCACGCT GAAGCTGATT CCGGGCAAGC TGTCGGTCGC CAGCGCACGC TGA
|
Protein sequence | MNDTPHADLE TTPANPRRRQ WLHGAAAGLA GLALGLLAAA PARADDSGTR LRIGFQKYGN FVVLKARGTL EKRLASQGVT VQWLEFPAGP QLLEGLNAGA IDVGTVGETP PIFAQAAGVD FVYIGNEPPA PRGEAIVVLP DSPIRTLAQL RGKKVAFNKG SNVHYLLVKA LEHAGLTYAD IQPIYLTPAD ARAAFVQRSV DAWVIWDPYL AAAERQLGAR VVANGEGLVR NTQYYLAARK YAAAHPQVLR ALLDEVDSVD RWARDHVPEV AAQLSPLVGL DAPTLEVALK RAGYGVQPIT DATVAYQQSI ADAFTTLKLI PGKLSVASAR
|
| |