Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3352 |
Symbol | |
ID | 6126087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 199609 |
End bp | 200529 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641650462 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001776997 |
Protein GI | 170735737 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.17239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAATT TTCTCGTCAA ACGCCTGTTC GGCCTGCTGC CCACGCTCGC GATCGTCGCG GTGCTGGTGT TCCTGTTCGT GCACCTGCTG CCCGGCGACC CGGCGCGGCT CGCGGCCGGC CCCGAAGCCG ACGACGCGAC GGTCGCGCTC GTGCGTGCCG ATCTCGGGCT CGACAAGCCG ATGCCGACCC AGTTCGCGAA CTTCTTCGTG AAGATCGCGC ACGGCGATTT CGGCATCTCG ACGCGCAGCA AGCGGCCAGT GTCGACCGAG ATCGGCGAGC GCTTCATGCC GACGCTGCTG CTCACGCTCG TCAGCATGGT GTGGGCGACG GCGATCGGGA TGGCGATCGG GATCGCGTCG GCCGTGTGGC GCAATCGCTG GCCCGACCGA CTCGGGATGA CGATCGCGGT GTCGGGTATT TCGTTTCCCG CGTTCGCGCT CGGCATGCTG CTGATGGAAA TCTTCTCGGT GAAGCTCGGC TGGCTGCCGG TCGTGCCGGA CGGCACGTGG AAGAGCTACG TGCTGCCGTC GCTGACGCTC GGCGCCGCGG TCGCCGCCGT GATGGCGCGC TTCACGCGCG CGTCGTTCGT CGAGGTGCTG AACGAGGACT TCGTGCGCAC CGCGCGCGCG AAGGGCGTGC ACGAGCCGAT GGTCGTGCTC AAGCATTGCC TGCGCAACGC GATGATCCCG GTCGTCACGA TGATGGGGCT GCAGTTCGGC TTCCTGCTCG GCGGCTCGAT CGTCGTCGAG GCCGTGTTCA ACTGGCCGGG GCTCGGCCGC CTGCTGGTCG ATGCGGTGAC GATGCGCGAC TACCCGGTGA TCCAGGCGAT CGTGCTGCTG TTCTCGCTGG AATTCATCCT GATCAACCTG ACCGTCGACG TGCTGTACGC GGTCATCAAC CCGACCATCC GGTTCAAGTG A
|
Protein sequence | MLNFLVKRLF GLLPTLAIVA VLVFLFVHLL PGDPARLAAG PEADDATVAL VRADLGLDKP MPTQFANFFV KIAHGDFGIS TRSKRPVSTE IGERFMPTLL LTLVSMVWAT AIGMAIGIAS AVWRNRWPDR LGMTIAVSGI SFPAFALGML LMEIFSVKLG WLPVVPDGTW KSYVLPSLTL GAAVAAVMAR FTRASFVEVL NEDFVRTARA KGVHEPMVVL KHCLRNAMIP VVTMMGLQFG FLLGGSIVVE AVFNWPGLGR LLVDAVTMRD YPVIQAIVLL FSLEFILINL TVDVLYAVIN PTIRFK
|
| |