Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3342 |
Symbol | |
ID | 6126077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 190556 |
End bp | 191542 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641650452 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001776987 |
Protein GI | 170735727 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.893011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACC GTATCGCCGA CGGCCGCGTC AAATTCCGGC ACCTGCAATG CTTTCTCGCG GTCGCGCAGC TGGGCGGCGT GCAGAAGGCG GCCGAAAGCC TGTCGATCAC GCAACCGGCC GTGTCGAAGA CGATCGCCGA GCTGGAGGCG ATCCTCGGCG TGAAGCTGTT CGAGCGCGGC CGGCACGGCG CGCAGCCCAC CCGCGAAGCG CAACTGTTCA TGCCGCACGC GAATGCGTGC GTGCTGGCGC TGCGGCAGGG CGTCGGGCTG CTGGCGCGCG AGGGCGGGGC GGCGGCCGCG ACACTGGAAA TCGGCATGCT GCCGACCGTC GCGGCCTCGC TCGCGCCGGC CTTGATGAAG GCGCTGACCG CGCGCTGGCC GCGCATCGTC GTGCGGATCG CGACGGCCGC GAACGCCGAG TTGCTCGAGC GTCTGAAAGC CGGGGCGATC GAATGCGCGA TCGGGCGGCT GTCGGAGCCG GAGCGGATGA TCGGGCTCGC GTTCGAGCAG TTGTACAACG AGCCGCTCGT CGCGGTCGTG CGCGCCGGGC ATCCGCTGCT TGCGAGCGCG GCGCCGGCCG CCGAGCTGGC GCGCTATCCG GTCGTGCTGC CGCCGTTCGG CACGCTGATC CGCCAGTCCG CCGAGCAACT GCTCGGCGCA TGCGGCGCGC CGCCGCTGGA TTCGTTCATC GAGGTGCTGT CGGTATCGGT CGCGCGCGCG CTGGCGCTCG AGAACGACGC GGTCTGGTTC GTGCCGCTCT ATGCCGCCGA ATACGACCTG TCGGCCGGTG CGCTGGCGCG CCTGCCGCTG CCGGCGGCGG GCACCGACGA GCCGGTCGGG CTCGTGCTGC GTACCGATGC GCAGCCGTCG CCGGTCGCGC GCACGCTGAT CGACGCGGTG CGCGACATCG CGCGGTCGCG GTTCGGCGAT GCACGCCCGC ACCGGGCGCC ACGCGCGGCG CGCAAGCCTG CTCGCGGCAA GCGTTGA
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Protein sequence | MNNRIADGRV KFRHLQCFLA VAQLGGVQKA AESLSITQPA VSKTIAELEA ILGVKLFERG RHGAQPTREA QLFMPHANAC VLALRQGVGL LAREGGAAAA TLEIGMLPTV AASLAPALMK ALTARWPRIV VRIATAANAE LLERLKAGAI ECAIGRLSEP ERMIGLAFEQ LYNEPLVAVV RAGHPLLASA APAAELARYP VVLPPFGTLI RQSAEQLLGA CGAPPLDSFI EVLSVSVARA LALENDAVWF VPLYAAEYDL SAGALARLPL PAAGTDEPVG LVLRTDAQPS PVARTLIDAV RDIARSRFGD ARPHRAPRAA RKPARGKR
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