| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3212 |
|---|
| Symbol | |
|---|
| ID | 6126191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 29101 |
|---|
| End bp | 29901 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641650323 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001776858 |
|---|
| Protein GI | 170735598 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.177624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAG CACATCGCGG TACCGCCCTC ATTACCGGCG CGTCGTCGGG CATCGGCGCC
GTCTACGCGG ACCGCCTCGC GCGCCGCGGC TACGACTTGA TCCTGGTCGC GCGCAATCGC
GACCGGCTGA GCGCCCTCGC CGAGCGCATC ACGAACGACA CGCAGCGCAG CGTCGAGATC
GTCGACGCGG ACCTCAACGA CCGCGCGGCG CTCGCCGGCG TCGAAGCCAA GCTGAAACAG
GACGCGAGCA TCACGCTGCT CGTGAACAAC GCGGGCATCG GCACGCATGC GCCGCTGCTC
GACAGCGACG TCGACGCGAT GACGCGGATG ATCGACCTGA ACGTGACCGC GCTCACGCGC
CTGACCTATG CGGCCGTGCC CGGCTTCGTC GCACGCGGCC ACGGCGCGGT GATCAACATT
GCGTCGATCG TCGCGATCTC GCCGGAAACG CTGAACGGCG TGTACGGCGG CAGCAAGGCG
TTCGTGCTCG CGTTCAGCCA GTCGCTGCAT CACGAGCTCG CCGACAAGGG CGTGCAGGTG
CAGGCCGTGC TGCCCGGCGC GACGGCCACC GAGTTCTGGC AGACGGGCGG CCTGCCGCTC
GAGCACCTGC CGAAGGAAAT CGTGATGACG GCGCCGGACA TGGTCGATGC GGCGCTGATA
GGGTTCGATC GCGGCGAACT CGTGACGATC CCGTCGCTGC ATGCGGGCGA CGAATGGGAG
GCGTACGAGG CCGCGCGCCG CACGATGGCG CCGCATTTAT CGGCCAATAC GCCCGCGCCG
CGCTACACCG CGGCGCGCTA G
|
|---|
| Protein sequence | MTQAHRGTAL ITGASSGIGA VYADRLARRG YDLILVARNR DRLSALAERI TNDTQRSVEI
VDADLNDRAA LAGVEAKLKQ DASITLLVNN AGIGTHAPLL DSDVDAMTRM IDLNVTALTR
LTYAAVPGFV ARGHGAVINI ASIVAISPET LNGVYGGSKA FVLAFSQSLH HELADKGVQV
QAVLPGATAT EFWQTGGLPL EHLPKEIVMT APDMVDAALI GFDRGELVTI PSLHAGDEWE
AYEAARRTMA PHLSANTPAP RYTAAR
|
|---|
| |