Gene Bcenmc03_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3164 
Symbol 
ID6124824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3511301 
End bp3512029 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID641639757 
ProductGntR family transcriptional regulator 
Protein accessionYP_001766443 
Protein GI170734496 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID[TIGR03338] phosphonate utilization associated transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0161984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC CGAACGCGCT CAGCGCCATC GAACTCCTGC AAAGCCAGTC GCTCGCGATG 
ATCGTCCAGG ACATGCTCGA GCGCGCGATC GTCTCCGGCG AATACGCGCC CGGCGAAAAG
CTCAACGAAG TCGAGATTGC GACGAAGCTG AACGTGTCGC GCGGCCCGGT GCGCGAGGCG
TTTCGCGCGC TGGAGCAGGC CGGCCTGCTG CGCAACGAGA AGAATCGCGG CGTGACCGTG
CGGGTCGTGC CGCTGCGCGA GGCCGAGGAA ATCTACGAAG TGCGCGCGAT GCTCGACGAA
TCGGTCGCAC GCGCGCTCGC GAAGCGCATC TCGCCCGAGA CGCTGAAGGT GCTGAAGGGC
ATCATCCAGT CGATGAAGGA CGCCGCGAAG ACGCACGACG TCACGCGCTA TACCGAGCTG
AACGTGCAGT TCCACGACGC GATGGTCGTC GGCGTCGGCA ATACCCATCT CACCGATACC
TACCGCCGGC TCGTGCGCCA GCTCGGCCTG CTGCGCCAGG CGGCGATCGA GGCCGAGGAG
GATGCGATCG CCGTGTCGGC GGCCGAGCAC GACAAGATCG TGCAGGCGCT CGCGGCCGGC
GACGAGGACA AGGCCGTCGC GCTCGTGCGC GAGCACGTCG CGCACGGCCT CGCGCGGATG
CGCCGTACGC ACGACGAGCA GGGGCTGCCT GCAACGGGCA AGGCGGCGCG GGAGAAGGCC
GGCGCGTAA
 
Protein sequence
MTAPNALSAI ELLQSQSLAM IVQDMLERAI VSGEYAPGEK LNEVEIATKL NVSRGPVREA 
FRALEQAGLL RNEKNRGVTV RVVPLREAEE IYEVRAMLDE SVARALAKRI SPETLKVLKG
IIQSMKDAAK THDVTRYTEL NVQFHDAMVV GVGNTHLTDT YRRLVRQLGL LRQAAIEAEE
DAIAVSAAEH DKIVQALAAG DEDKAVALVR EHVAHGLARM RRTHDEQGLP ATGKAAREKA
GA