Gene Bcenmc03_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3113 
Symbol 
ID6124774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3454448 
End bp3455239 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID641639705 
Productpyrimidine 5'-nucleotidase 
Protein accessionYP_001766393 
Protein GI170734446 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.735685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCGC GCCGCCCGCC TGCCAGCCCC GACCTGCCGG CCCCGCTGCG GCGCCGGCGC 
ATCTCGCGCA GCCGGCCGCG CGCCGGCGCG CCCGTCTGGC TGTTCGATCT CGACAACACG
CTGCACCACG CGTCGCACGC GATCTTTCCC GAGATCAACC GTGCGATGAC GCAATACATC
ATCGACGCGC TGCAGGTCGG GCGCGCCGAA GCCGACCGCC TGCGCAACGG CTACACCGAG
CGCTACGGCG CCGCGCTGCT CGGCCTCACG CGCCACCACC CGATCGACCC GCACGATTTC
CTGCGCGTGG TCCACACGTT TTCCGACCTG CCCGCGATGG TGCGCGCCGA GCGCGGCCTC
GCGCGCATCG TCGCCGCGCT ACCGGGCCGC AAGCTGATCC TGACCAACGC GCCCGAAAAT
TATGCGCGCG CGGTGCTGCG CGAGCTGGGC ATCGAGCGGC TGTTCGAGCG CGTGATCGCG
ATCGAGCACA TGCGCGACCG CCGCACGTGG CGCGCGAAGC CCGATCACAC GATGCTGCGC
CGGACGCTGC GCGCCGCGCA CGCACGGCTC GCCGACGCGA TCCTCGTCGA GGACACGCGC
GGCCACCTAA AGCGCTACAA GCGTCTGGGC ATCGGCACGA TATGGATCAC CGGCCACCTG
CCCGGCCATC TGCCGACAAC CGGACGCCCG CATTATGTCG ACCAGCGCAT TCGTTCGTTA
AAATCGCTGC GACTGGGCAC ACGATCGGGG CGACAAAAAT GCAGCCGACT TACCCGCAGG
ACCAAGCCGT AA
 
Protein sequence
MSARRPPASP DLPAPLRRRR ISRSRPRAGA PVWLFDLDNT LHHASHAIFP EINRAMTQYI 
IDALQVGRAE ADRLRNGYTE RYGAALLGLT RHHPIDPHDF LRVVHTFSDL PAMVRAERGL
ARIVAALPGR KLILTNAPEN YARAVLRELG IERLFERVIA IEHMRDRRTW RAKPDHTMLR
RTLRAAHARL ADAILVEDTR GHLKRYKRLG IGTIWITGHL PGHLPTTGRP HYVDQRIRSL
KSLRLGTRSG RQKCSRLTRR TKP