| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3060 |
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| Symbol | dppF |
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| ID | 6124721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 3399098 |
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| End bp | 3400114 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641639652 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001766340 |
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| Protein GI | 170734393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0486798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAG TCCACGAAAC GCGTGCCACG TCGCACGACG AGGAAGCGGT ACTGGTGGCC
GACGGCCTCG CGAAGCACTA TTCGGTGAAG CGCGGGATGT TCGGGCAGGG CACGGTGAAG
GCGCTGAACG GCGTGTCGTT CTCGCTGAAG CGCGGCAAGA CGCTCGCCGT CGTCGGCGAG
TCGGGCTGCG GGAAATCGAC GCTCGCGCGC CAGCTCACGA TGATCGAGAC GCCCACTGCG
GGCAGCCTGA CGATCGACGG CAAGAACGTG GCCGGCGCGA GCCGCGACAC GGTCGCCGAC
CTGCGCCGCC GCGTGCAGAT GGTATTCCAG AACCCGTTTG CATCGCTGAA CCCGCGCAAG
ACCGTCGAGC AGACGCTTTC CGAGCCGCTC GAGATCAACG CGAACCTGAC GGCCGCCGAG
CGCGCGGCGC GCATCGCGCA GATCATGCGC ACGGTCGGCC TGCGCCCCGA GCACGCGAAG
CGCTATCCGC ACATGTTCTC GGGCGGCCAG CGCCAGCGGG TCGCGATCGC GCGCGCGATG
ATTCTCGATC CGCGCATCGT CGTCGCGGAC GAGCCGGTGT CCGCGCTCGA CGTGTCGATC
CAGGCGCAGA TCCTGAATCT CTTCATGGAT CTGCAGGAGC AGTTCAAGAC GAGCTACGTG
TTCATCTCGC ACAACCTGTC GGTGGTCGAA CACGTTGCCG ACGACGTGAT GGTGATGTAC
TTCGGCAGCG TCGCCGAGCT CGGCGACAAG GCGACGATCT ACGCACGGCC GCGCCATCCG
TACACGCGGG CGCTGATGTC GGCGACGCCG GCGATCTTCG AGGAAGACCG CCGCGTGCAG
ATCAAGCTGC AAGGCGAGTT GCCGTCGCCG CTCAATCCGC CGTCGGGCTG CGCGTTCCAC
CAGCGCTGCC CGTACGCGGT CGAGCGGTGC CGCGTCGAGG AGCCGCAATT GCGCGAAGTG
GACGGCCGGC GTGTAGCCTG CCATCGCGCC GAGGAGGTCG GGGAGGAGAA TGCCTGA
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| Protein sequence | MNAVHETRAT SHDEEAVLVA DGLAKHYSVK RGMFGQGTVK ALNGVSFSLK RGKTLAVVGE
SGCGKSTLAR QLTMIETPTA GSLTIDGKNV AGASRDTVAD LRRRVQMVFQ NPFASLNPRK
TVEQTLSEPL EINANLTAAE RAARIAQIMR TVGLRPEHAK RYPHMFSGGQ RQRVAIARAM
ILDPRIVVAD EPVSALDVSI QAQILNLFMD LQEQFKTSYV FISHNLSVVE HVADDVMVMY
FGSVAELGDK ATIYARPRHP YTRALMSATP AIFEEDRRVQ IKLQGELPSP LNPPSGCAFH
QRCPYAVERC RVEEPQLREV DGRRVACHRA EEVGEENA
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