Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3016 |
Symbol | |
ID | 6124677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 3353061 |
End bp | 3354215 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641639608 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_001766296 |
Protein GI | 170734349 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.926404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATCGA TACCCTCTTC CGCTGCCGCA CGCCAGACCC AACCGGCCGC CGCGCCCCGT ACGCAAAACG ACGCATTCGT GCGCATCGAA AACGTCGTGA AGAAATTCGG CGACAGCACG GCCGTCGACA ACGTGAACCT GACGATCGCG AAGAACGAGC TGTTCGCGCT GCTCGGCAGT TCGGGCTGCG GCAAGTCCAC GCTGCTGCGC ATGCTCGCCG GGCTGGAAAC GGCCACCTCC GGCAAGATCT TCGTCGACGG CGAGGATCTC GCGTCGCTGC CGCCGTACCG CCGCCCGGTC AACATGATGT TCCAGTCGTA CGCGCTGTTC CCACACATGA CGGTCGAATC GAACGTCGCG TTCGGCCTGA AGCAGGAAGG CACGCCGAAA AACGAGATCA GGGAACGCGT GGCCGACGCG CTCGCGCTCG TGCAGATGAG CAAGTACGCC AAGCGCAAGC CGCATCAGCT ATCCGGCGGC CAGCAGCAGC GCGTCGCGCT GGCCCGCTCG CTGGTGAAGC GCCCGAAGCT GCTGCTGCTC GACGAGCCGA TGTCCGCGCT CGACAAGAAG ATTCGCCAGA AGACCCAGCT CGAACTCGTG AACATCATCG AGAAGGTCGA CGTGACCTGC GTGATGGTCA CGCACGACCA GGAAGAGGCG ATGACGATGG CGAGCCGCCT CGCGGTGATG AGCGAAGGCA AGATCGTGCA GATCGGCTCG CCCGGCGAAG TCTACGAATA CCCGAACAGC CGCTTCTCCG CCGAATTCAT CGGCTCGACC AACCTGTTCG AGGGGCGCGT GGTCGAGGAC GAGCCCGATC ACATCTTCGT CGAAAGCGAC GACCTCGAAA CGCGCATGTA CGTGAGCCAC GGCGTGACCG GCCCGCTCGG GATGCCGGTC GGCATCTCGG TGCGCCCGGA GCGCATCCAC GTATCGCGCG AGAAGCCGGG CTCGAAGCAC AACTGGGCGC GCGGCGTCGT CACCGACATC GCGTACATGG GCAGCTATTC GCTGTACCAC GTGCGTCTGC CGAGCGGCAA GACGGTGGTG TCGAACCTGT CGAGCTCGCA CCTGATGAAC GACGGCGCAC CGGCGTGGAA CGACGACGTG TTCGTGTCGT GGTCGCCGGC CAGCGGCGTC GTGCTGACGC AGTGA
|
Protein sequence | MQSIPSSAAA RQTQPAAAPR TQNDAFVRIE NVVKKFGDST AVDNVNLTIA KNELFALLGS SGCGKSTLLR MLAGLETATS GKIFVDGEDL ASLPPYRRPV NMMFQSYALF PHMTVESNVA FGLKQEGTPK NEIRERVADA LALVQMSKYA KRKPHQLSGG QQQRVALARS LVKRPKLLLL DEPMSALDKK IRQKTQLELV NIIEKVDVTC VMVTHDQEEA MTMASRLAVM SEGKIVQIGS PGEVYEYPNS RFSAEFIGST NLFEGRVVED EPDHIFVESD DLETRMYVSH GVTGPLGMPV GISVRPERIH VSREKPGSKH NWARGVVTDI AYMGSYSLYH VRLPSGKTVV SNLSSSHLMN DGAPAWNDDV FVSWSPASGV VLTQ
|
| |