Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2938 |
Symbol | |
ID | 6124599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 3268225 |
End bp | 3269820 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641639530 |
Product | extracellular solute-binding protein |
Protein accession | YP_001766218 |
Protein GI | 170734271 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGTCA AGCTGTTCGC CGCGGCCGCC GTGGCCACGG CCCTCGCCGC CCCCGGCCTC GCCGCCGCCA AGCCGCTCAC CGTCTGCACG GAATCGAGCC CGGACGGCTT CGACGTCGTG CAGTACAACT CGCTCGTCAC GACCAACGCG TCGGCCGACG TGGTCTTCAA CACACTCGTG TCCTACGACG AAGCCGCGAA GAAAGTCGTG CCCGCGCTCG CGGACAAATG GGAAGCGAGC GCCGACGGCC TCACGTACAC GTTCCACCTG CGCCCGAACG TCGCATTCCA GACCACCGAC TACTTCAAGC CGGGCCGCAC GCTGAACGCG GACGATGTCG TGTTCACGTT CACGCGGATG CTCGACGATG CGAATCCGTG GCACAAGGTC GCCGGCGCGA GCGGCTTTCC GCACGCGCAG TCGATGGGCC TCGTGAAGCT CGTGAAATCG GTCACGAAGG TCGACGACAG CACGGTGAAG TTCGTGCTGA ACGAACCGAA CGCGACGTTC GTGCCGATCC TGACGATGGG CTTCGCGTCG ATCTACTCGG CCGAATACGC GGACCAGCTG CTGAAGGCCG GCAAGCAGGC CGACCTGAAC GCGAAGCCGG TCGGCACCGG CCCGTTCGTG CTGAAGAGCT ACACGAAGGA CGCGCTGATC CGCTACGACG CGAACCCGAC GTACTGGGGC GCGAAGCCGA AGGTCGACCG GCTGATCTAC GCGATCACGC CCGACCCGTC GGTGCGCCTG CAGAAGGTGA AGGCCGGCGA ATGCCAGATC GCGCTGTCGC CGAAGCCGCA GGACGTGCTC GCCGCGAAAG GCGAAAGCGC GCTGAAGGTC GTGCAGACGC CCGCGTTCAT GACCGCGTTC GTCGCGCTGA ACACGCAGAA GAAGCCGCTC GACAACGACA AGGTGCGCGA GGCGCTGAAC CTCGCGTTCG ACCGTGCGAC CTACCTGAAG GTCGTGTTCG ACAACACCGC GACGGCCGCG AACAACCCGT ATCCGCCGAA TACGTGGAGC TATGCGAAGG ACGTCGCGCC GTATGCGTAC GATCCCGCGA AGGCGAAGCA GCTGCTCGCG CAGGCCGGCT TCCCGAACGG CTTCTCGACC ACCATCTGGA CGCGCCCGAC CGGCAGCGTG CTGAATCCGA ACCCGAAGGT CGGCGCGGAA CTGCTGCAGG CCGACCTCGC GAAGATCGGC GTGAAGGCCG AAGTGAAGGT GATCGAATGG GGCGAGCTGA TCAAGCAGGC GAAGCTCGGC CAGCATGACA TGCTGTTCAT GGGCTGGGCC GGCGACAACG GCGATCCGGA CAACTACCTG TCGCCGCTGT TCAGCTGCAA CGCGGTGAAG TCGGGCATCA ACTTCGCGCG CTTCTGCGAT GCGCAACTCG ACAAGCTGAT CGCCGACGGC AAGTCGACCG CTGATCAGGC CAAGCGCGCG AAGCTCTATG AAAGCGCGCA GAAGATCATC CACGACCAGG CGCTGTGGAT TCCGCTCGGC TACCCGACCG CGGCCGCGTT GACGCGCACG AACGTGAGCG GCTATCACGT GAGTCCGTTC GGACGACAGA ACTTCACGAC GGTCGCCGTG CAGTAA
|
Protein sequence | MHVKLFAAAA VATALAAPGL AAAKPLTVCT ESSPDGFDVV QYNSLVTTNA SADVVFNTLV SYDEAAKKVV PALADKWEAS ADGLTYTFHL RPNVAFQTTD YFKPGRTLNA DDVVFTFTRM LDDANPWHKV AGASGFPHAQ SMGLVKLVKS VTKVDDSTVK FVLNEPNATF VPILTMGFAS IYSAEYADQL LKAGKQADLN AKPVGTGPFV LKSYTKDALI RYDANPTYWG AKPKVDRLIY AITPDPSVRL QKVKAGECQI ALSPKPQDVL AAKGESALKV VQTPAFMTAF VALNTQKKPL DNDKVREALN LAFDRATYLK VVFDNTATAA NNPYPPNTWS YAKDVAPYAY DPAKAKQLLA QAGFPNGFST TIWTRPTGSV LNPNPKVGAE LLQADLAKIG VKAEVKVIEW GELIKQAKLG QHDMLFMGWA GDNGDPDNYL SPLFSCNAVK SGINFARFCD AQLDKLIADG KSTADQAKRA KLYESAQKII HDQALWIPLG YPTAAALTRT NVSGYHVSPF GRQNFTTVAV Q
|
| |