| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2932 |
|---|
| Symbol | |
|---|
| ID | 6124593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 3260107 |
|---|
| End bp | 3262824 |
|---|
| Gene Length | 2718 bp |
|---|
| Protein Length | 905 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641639524 |
|---|
| Product | methionine synthase |
|---|
| Protein accession | YP_001766212 |
|---|
| Protein GI | 170734265 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC ACATGATGCG CCTTGCCGGC CTCGAGCCGT TCAACGTCAC GCCCGGGACG
CTCTTCATCA ACGTCGGCGA ACGCACCAAC GTCACCGGCT CGAAGGCGTT CGCACGGATG
ATCCTCAACG GCCAGTTCGA CGAGGCGCTC GCCGTCGCGC GCCAGCAGGT CGAGAACGGC
GCGCAGGTGA TCGACATCAA CATGGACGAG GCGATGCTCG ATTCGAAGGC GGCGATGGTG
CGCTTCCTGA ACCTGATCGC GTCGGAGCCG GACATCGCGC GCGTGCCGAT CATGATCGAC
TCGTCGAAGT GGGAGGTGAT CGAAGCCGGC CTCAAGTGCG TGCAGGGCAA GGCGATCGTG
AACTCGATCT CGCTGAAGGA AGGCGAGGAC GCGTTCCGTC ACCACGCGAA CCTGATCCGC
CGCTACGGCG CGGCCGCGGT CGTGATGGCG TTCGACGAAA CCGGCCAGGC CGATACCTAC
GCGCGCAAGA CCGAGATCTG CAAGCGCTCG TACGACTTCC TCGTGAACGA AGTCGGCTTC
CCGCCGGAAG ACATCATCTT CGACCCGAAC ATCTTCGCGG TCGCGACCGG CATCGAGGAG
CACAACAACT ACGCGGTCGA CTTCATCGAG GCGACCCGCT GGATCAAGCA GAACCTGCCG
CACGCGAAGG TGAGCGGCGG CGTGTCGAAC GTGTCGTTCT CGTTCCGCGG CAACGACCCG
GTGCGCGAGG CGATCCACAC CGTGTTCCTG TATCACGCGA TCCAGGCCGG GATGGACATG
GGCATCGTGA ACGCGGGCCA GCTCGGCGTG TACGCCGATC TCGACCCCGA GCTGCGCGAG
CGCGTCGAGG ACGTGATCCT GAACCGCCGC GACGATTCCA CCGATCGCCT GCTGGAGATC
GCCGACAAGT TCAAGGCGGG CGGCGCGAAG AAGGAAGAGA ACCTCGAGTG GCGCAACCAG
CCGGTCGAGA AGCGGCTCTC GCATGCGCTC GTGCACGGCA TCACGACCTT CATCGTCGAG
GACACCGAGG AAGTGCGCGC GAAGATCGCC GCGGCCGGCG GCCGTCCGAT CAACGTGATC
GAAGGGCCGC TGATGGACGG GATGAACATC GTCGGCGACC TGTTCGGCCA GGGCAAGATG
TTCCTGCCGC AGGTCGTGAA GTCGGCGCGC GTGATGAAGC AGGCGGTCGC GCACCTGATC
CCGTTCATCG AGGAAGAAAA ACGCCTGCTC GCGGAAGCGG GCGGCGACGT GCGCGCGAAG
GGCAAGATCG TCATCGCGAC CGTCAAGGGC GACGTGCACG ACATCGGCAA GAACATCGTG
TCGGTCGTGC TCCAGTGCAA CAACTTCGAA GTGGTCAACA TGGGCGTGAT GGTCCCGTGC
AACGAGATCC TCGCGAAGGC GAAGGTCGAG GGCGCGGACA TCATCGGGCT GTCGGGCCTC
ATCACGCCGA GCCTCGAGGA AATGGCGTAC GTCGCGTCCG AAATGCAGCG CGACGACTAC
TTCCGCGTGA AGAAAATTCC GCTACTGATC GGCGGCGCCA CGACGTCGCG CGTGCACACG
GCCGTGAAGA TCGCGCCGCA CTACGAAGGC CCGGTCGTCT ACGTGCCCGA TGCGTCACGC
TCGGTGTCGG TCGCGTCGAA CCTGCTGTCC GACGAAGGCG CGGCGAAGTA TCTGGACGAG
CTGAAGTCCG ACTACGAACG CATCCGCGAC CAGCACGCGA ACCGCAAGGC GCAGCCGATG
GTCACGCTCG CCGAAGCACG CGCGAACAAG ACCAAGATCG ACTGGGCCGG CTACCAGCCG
GTGAAGCCCA AGTTCATCGG CCGCCGCGTG TTCAAGAATT ACGACCTGAA CGAGCTCGCG
AACTACATCG ACTGGGGCCC GTTCTTCCAG ACCTGGGACC TCGCGGGCCC GTACCCGGCG
ATCCTGAACG ACGAGATCGT CGGCGAATCG GCGCGGCGCG TGTTCTCCGA CGCGAAGTCG
ATGCTCGCGC GCCTGATCCA GGGCCGCTGG CTGACCGCGA ACGGCGTGAT CGCGCTGCTG
CCGGCGAATA CGGTCAACGA CGACGACATC GAGATCTACA GCGACGAGTC ACGCTCGGAA
GTGCTGCTCA CGTGGCGCAA CCTGCGCCAG CAGAGCGTGC GCCCGGTGGT CGACGGCGTG
ATGCGGCCGA ACCGTTCGCT CGCCGACTTC ATCGCGCCGA AGGAGTCGGG GGTGGCTGAC
TACATCGGGA TGTTCGCGGT GACGGCCGGC CTCGGCGTCG ACGTGAAGGA AAAGCAGTTC
GAAGCCGACC ACGACGACTA CAGCGCGATC ATGCTGAAGG CGCTCGCCGA CCGTTTCGCG
GAAGCGTTCG CCGAAGCGAT GCACGCGCGC GTGCGGCGCG AGCTGTGGGG CTATGCGAGC
GGCGAGACGC TCGACAACGA CGCGCTGATC GCCGAGAAGT ACGCGGGCAT CCGCCCGGCG
CCCGGCTATC CGGCTTGCCC CGACCACCTC GTGAAGCGCG ACATGTTCGA CGTGCTGCAC
GCAGACGAGA TCGGCATGAG CGTGACGGAT TCGCTCGCGA TGCTGCCGGC GGCGAGCGTG
TCGGGTTTCT ATCTCGCGCA CCCGGACAGC CGCTACTTCT CGGTCGGCAA AATCGGGCAG
GATCAGCTCG AGGACTACGC GCAACGCATG GCGCTGTCGC TGGACGACGC GCGCCGCGCG
CTCGCGCCGC AACTCTGA
|
|---|
| Protein sequence | MTDHMMRLAG LEPFNVTPGT LFINVGERTN VTGSKAFARM ILNGQFDEAL AVARQQVENG
AQVIDINMDE AMLDSKAAMV RFLNLIASEP DIARVPIMID SSKWEVIEAG LKCVQGKAIV
NSISLKEGED AFRHHANLIR RYGAAAVVMA FDETGQADTY ARKTEICKRS YDFLVNEVGF
PPEDIIFDPN IFAVATGIEE HNNYAVDFIE ATRWIKQNLP HAKVSGGVSN VSFSFRGNDP
VREAIHTVFL YHAIQAGMDM GIVNAGQLGV YADLDPELRE RVEDVILNRR DDSTDRLLEI
ADKFKAGGAK KEENLEWRNQ PVEKRLSHAL VHGITTFIVE DTEEVRAKIA AAGGRPINVI
EGPLMDGMNI VGDLFGQGKM FLPQVVKSAR VMKQAVAHLI PFIEEEKRLL AEAGGDVRAK
GKIVIATVKG DVHDIGKNIV SVVLQCNNFE VVNMGVMVPC NEILAKAKVE GADIIGLSGL
ITPSLEEMAY VASEMQRDDY FRVKKIPLLI GGATTSRVHT AVKIAPHYEG PVVYVPDASR
SVSVASNLLS DEGAAKYLDE LKSDYERIRD QHANRKAQPM VTLAEARANK TKIDWAGYQP
VKPKFIGRRV FKNYDLNELA NYIDWGPFFQ TWDLAGPYPA ILNDEIVGES ARRVFSDAKS
MLARLIQGRW LTANGVIALL PANTVNDDDI EIYSDESRSE VLLTWRNLRQ QSVRPVVDGV
MRPNRSLADF IAPKESGVAD YIGMFAVTAG LGVDVKEKQF EADHDDYSAI MLKALADRFA
EAFAEAMHAR VRRELWGYAS GETLDNDALI AEKYAGIRPA PGYPACPDHL VKRDMFDVLH
ADEIGMSVTD SLAMLPAASV SGFYLAHPDS RYFSVGKIGQ DQLEDYAQRM ALSLDDARRA
LAPQL
|
|---|
| |