Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2890 |
Symbol | |
ID | 6124552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 3215434 |
End bp | 3217560 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641639483 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_001766171 |
Protein GI | 170734224 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.146747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.825771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTCCC CCGCCATCCC CCCAACCGGC ACGGTCACGC GCGAACGGCG CGACAAGGTG CTCGTCGTCA CGATCGACCA TCCGCCCGTC AATGCGCTGT CCGCCGACGT GCGGCGCGGC CTCGCCGACG CACTCGACGC CGCGCAGGCC GACGACGCGA TCCGCGCGGT GCTGATCGTC GGCGCCGGGC GCAACTTCAT CGCGGGCGCC GACATCCGCG AATTCGGCAA GCCGCCCGTA CCGCCGTCGC TGCCCGACGT GTGCGAGCGG ATCGAATCGG GTACCAAGCC GGTCGTGGTC GCGCTGCACG GCGCGACGCT CGGCGGCGGC CTCGAAGTCG CGCTGGCCGC GCATTACCGG CTCGCGGTGC CCGGCGCGAA GCTCGGGCTG CCCGAAGTGA CGCTCGGCCT GCTGCCCGGC GCGGGCGGCA CGCAGCGCGC GCCGCGCCTG ATCGGCGCGA AGGCCGCGCT CGACCTGATG CTGACGGGTC GCCATGCGAG CGCCGAGGAA GCGCTCGCGC TCGGCCTCGT CGATCGCATC GCGCACAGCG ACGACACGCT CGCCGAAGGG CTCGCGTATG CGCAGGAACT CGTGTCGCTC GGCGCGCCGG TGCGTCGCAC GCGCGACGCG CAGGGGCTGG CCGACCGCGC GGCCGCGCAG GCCGCGATCG ACGCGGCGCG CGCGGAATTG CCGAAGAAGT CGCGAGGCCT GTTCTCGCCG GCGAAGATCG TCGACGCGGT CGAGGCCGCG CTCACGCAGT CGTTCGACGC GGGGATGAAG CTCGAACGCA ACCTGTTCCT GCAATGTCTC GACAGCCCGC AGCGCGCGGG CCTCGTGCAT GCGTTCTTCG CGGAACGCGA AGCGGCGAAG GCGCCCGAGG CGCGCCGCGC GAGCCCGCGG CCGGTCGAGC GGATCGGCGT GGTCGGCGGC GGCACGATGG GCGCGGGCAT CGCGGTCGCG GCGCTCGACG CAGGGCTGCC GGTGACGATG ATCGAGCGCG ACGAAGCATC GCTCGCGCGC GGCCGGGCGC ACGTCGAGAA GGTGTACGAC GGCCTCGTCG CGAAAGGGCG GATGACGCCG GCCGCGCACG CGGCGCGGCT CGCGCGCTTC AAGGGCAGCA CGTCGTACGA CGCGCTCGCG CAGGCCGACG TCGTGATCGA AGCCGTGTTC GAGGACATGG CCGTGAAGCA GGCCGTGTTC GCCGAACTCG CGCGCGTGTG CAAGCCGGGC GCGGTGCTCG CGACCAATAC GTCGTATCTC GACATCGACG CGCTCGCTGC GAGCATCGAC CGGCCGGCCG ACGTGATCGG CCTGCATTTC TTCTCGCCGG CCAACGTGAT GAAGCTGTTG GAGATCGTCG TGCCGGCGCG GGTGAGCCCG GACGTCGTCG CGACCGCGTT CGCGCTGGCC AAGCAGCTGA AGAAGACGCC GGTGCGCGCG GGCGTATGCG ACGGCTTCAT CGGCAACCGG ATCCTTGCCG TCTATCGGAC GGCTGCCGAC TACCTGATGG AAGACGGCGC GTCGCCGTAC CAGATCGATC GCGCGGTGCG CGGGTTCGGC TTCCCGATGG GCCCGTTCCA GGTGGTCGAT CTCGCGGGCG GCGACATCGG CTGGGCGACC CGCAAGCGCC GCGCGGCGAC GCGCGATCCG AACGCGCGCT ACGTGGAGAT TTCCGACCGG CTGTGCGAGC GCGGCTGGTT CGGGCAGAAG ACCGGCCGCG GCTACTACCT GTATCCGGAC GGCGCGCGCG TCGGCACGCC CGACCCGGAA GTGGGGGCGA TCGTCGCGGA AGAACGCGCG AAGAAAGGCA TCACGCCGCG CACCTTCACC GACGACGAGA TCCTGCGCCG CTACCTCGCC GCGATGATCA ACGAAGGCGC GAACGTCGTG CACGAGAAGA TCGCGCTGCG CCCGCTCGAC GTCGACGCGG TGTTCCTGTA CGGCTACGGC TTCCCGCGCT ATCGCGGCGG CCCGATGCAC TACGCGGACA CGGTCGGCCT CGCGAACGTG CTCGCCGATA TCCGCGCGTT CGCGAAGGAA GATCCGCTGT TCTGGAAGCC GTCGCCGCTG CTCGTCGATC TCGTCGCGCG CGGCGCCGAT TTCGCGAGCC TGAACCGCAT CGACTGA
|
Protein sequence | MNSPAIPPTG TVTRERRDKV LVVTIDHPPV NALSADVRRG LADALDAAQA DDAIRAVLIV GAGRNFIAGA DIREFGKPPV PPSLPDVCER IESGTKPVVV ALHGATLGGG LEVALAAHYR LAVPGAKLGL PEVTLGLLPG AGGTQRAPRL IGAKAALDLM LTGRHASAEE ALALGLVDRI AHSDDTLAEG LAYAQELVSL GAPVRRTRDA QGLADRAAAQ AAIDAARAEL PKKSRGLFSP AKIVDAVEAA LTQSFDAGMK LERNLFLQCL DSPQRAGLVH AFFAEREAAK APEARRASPR PVERIGVVGG GTMGAGIAVA ALDAGLPVTM IERDEASLAR GRAHVEKVYD GLVAKGRMTP AAHAARLARF KGSTSYDALA QADVVIEAVF EDMAVKQAVF AELARVCKPG AVLATNTSYL DIDALAASID RPADVIGLHF FSPANVMKLL EIVVPARVSP DVVATAFALA KQLKKTPVRA GVCDGFIGNR ILAVYRTAAD YLMEDGASPY QIDRAVRGFG FPMGPFQVVD LAGGDIGWAT RKRRAATRDP NARYVEISDR LCERGWFGQK TGRGYYLYPD GARVGTPDPE VGAIVAEERA KKGITPRTFT DDEILRRYLA AMINEGANVV HEKIALRPLD VDAVFLYGYG FPRYRGGPMH YADTVGLANV LADIRAFAKE DPLFWKPSPL LVDLVARGAD FASLNRID
|
| |