Gene Bcenmc03_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2888 
Symbol 
ID6124550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp3213027 
End bp3214172 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID641639481 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001766169 
Protein GI170734222 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.397176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCC AGCACACAGA AGACCGCCGG ATGCTGGCGG ACACGTTGAA CCGCTTCATC 
GCCGAACAGT ACGCGTTCCC GGTGCGTGAC CGCATCGCGC AGTCGGCCGA AGGGTTCGAT
CGCGCGATGT GGCAGCGCTT CGCCGAACTC GGCACGGTCG GCGCGCTGTT CGCCGAAGCC
GACGGCGGCT TCGGCGGCGC GGGCTTCGAC ATCGCCGTGG TGTTCGAATG CCTCGGGCGC
GGGCTCGTCG TCGAGCCGTT TCTCGGCGCG CTGCTCGCGG GCCGTGCGCT CGCGCTCGCC
GGTGGCGCCG CGCATCGCGA CCGGCTCGCC GCGCTGATCG ACGGCAGCGC GAGCGCCGCG
TTCGCGCACG ACGAGCCGGG CTCGCACTAC GAACTGACGA CGGTGCGCAC GCGCGCCGAA
CGTTCGGGCG ACGGCTGGGT GCTGACCGGC GCGAAGGGCG TCGTCGACCA GGCCGCGCAG
GCGGCGTTCT TCGTCGTCAG CGCGCGCGTG TCCGGCAACG ACGACGACGC GGCCGGCATC
GGCCTGTTCG TCGTGCCGGC CGATGCGTCG GGCGTGTCGT TGCGCGATTA CAAGAAGATC
GACGGCGGCC GCGCGGCCGA AGTGCGCTTC GAGCGGGTCG CGCTGCCGGC CGCTGCCGCG
CTCGGCGCGC CGGATGCGCT CGACGGCGAA GCGGGCGCCG AGCTGCTCGA ACGCGTGCTC
GGCTACGGGC TGCTCGCGCT GTCGGCGGAA GCGCTCGGCG CGATGGACGT CGCGAAGGAG
CACACGCTCG ACTACCTGCG TACACGCAAG CAATTCGGGT TGCCGATCGG CAGCTTCCAG
GCGCTGCAGC ACCGGATGGC CGACCTGCTG CTCGAAGTCG AGCAGGCGCG CTCGGCCGTG
ATCAACGCGG CCGCGCAGCT CGATGCGCCG CGCGCGGTGC GCGAGCGCGC GCTCGCGGCG
GCGAAATACA GCATCGGCCG GATCGGCACG CTCGTCGCCG AGGAAAGCAT CCAGCTGCAC
GGCGGGATCG GGATGACGTG GGAGCTGCCG CTGTCGCACT ACGCGAAGCG GCTCGTGATG
ATCGATCACC AGCTCGGCGA CGAGGATCAC CATCTCGCGC GCTACATCGC GCTGTCGAAG
CAGTAA
 
Protein sequence
MDFQHTEDRR MLADTLNRFI AEQYAFPVRD RIAQSAEGFD RAMWQRFAEL GTVGALFAEA 
DGGFGGAGFD IAVVFECLGR GLVVEPFLGA LLAGRALALA GGAAHRDRLA ALIDGSASAA
FAHDEPGSHY ELTTVRTRAE RSGDGWVLTG AKGVVDQAAQ AAFFVVSARV SGNDDDAAGI
GLFVVPADAS GVSLRDYKKI DGGRAAEVRF ERVALPAAAA LGAPDALDGE AGAELLERVL
GYGLLALSAE ALGAMDVAKE HTLDYLRTRK QFGLPIGSFQ ALQHRMADLL LEVEQARSAV
INAAAQLDAP RAVRERALAA AKYSIGRIGT LVAEESIQLH GGIGMTWELP LSHYAKRLVM
IDHQLGDEDH HLARYIALSK Q