| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2668 |
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| Symbol | |
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| ID | 6124331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | + |
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| Start bp | 2971493 |
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| End bp | 2974180 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641639260 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001765950 |
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| Protein GI | 170734003 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGC AAGCGTTAAG AAGCGCGTTG CTGGCCGGAC CGGTTCAGCA TGAGCGCCTG
ATCAAACTGG ATACCCCGCT CGGGCCCGAC GTCCTGTTGC CGCAGCGCGT CACGGGACGA
TCGCGCCTCG GACGCCATTT CGAGTTCACC GTCGATACCG TGTCGGTATC CGACGACCTC
GAACTCAAGA AACTGATCGC GCAGCCGGTG ACGCTGTGGA TCCAGCAGGC CGACCAATCG
TACGCGCCGC ACCACGGCTA CGTGCATGCG GCCCGCCGGC TCGGGTCGGA CAGCGGCGTC
GCGCACCATC AGATCGTCTT TGCGTCGTTC CTGCACTTCC TGAAGTTCCG CCGCGATCAG
CGCATCTGGC AGGACCGGTC GGCGGACGAC ATCATCGCCG ACGTGCTGAA CCAGCATCCG
CAGGCCAAGG GCCGCTTCAC GTTCAAGCTC TACCAGCCGC TGCCGTCGCG CTCGTTCTGC
ATGCAATACG AGGACGACTG GAATTTCGTC CATCGCCTGA TGGAATCGGA AGGCCTGTAC
GGTTTCTGGG AACAGGACAG CGACGGCAAG TCGCACCGGC TCGTCATCGT CGATCGCATC
GACGCGTTGC CCGCGCTGTC GCCGCGAACC GTGCGCTTTC ATCACGCGGG CACGGGCGAC
GAAGCCGACA CGCTCGTCCA GTTCACCGGT ACGCGCACGC TGCGCAGCGT CGCGCGCACC
ACGCGCACGT TCGACTACAA GCAGCCGCCC ACCGCGTCGA ATCCGAAGGC CACTCATACG
CCGACGATCG CGAACCAGGG CGACCTGCCG CAGCAGCTCG AAGTCTACGA ATACACGGGT
GCCTACACGT ATCCCGAGCA GTCACGCGGC GACCATCTGT CGAAGATCTG GATGGAAGAG
CAGGAATCGC ACGCGAAGCG CTTTCACGGT GTCGGCGGTG TGCGGCGCAT GGACGCGGGA
CGCGTGTTCG AGTTCGCGGA ACATCCCGAA CACGACAAGG ACGATGCCGG CCAGCGCGAA
TTCGCCGTGA TCGAAACGGC GTGGGTCATC GTCAACAACC TGCCCGTGGC CGACGAGCCG
GCCGTTTTCC CGCACAGCCT GCAGGCCGAG ATCGGCAGCA TCATGCAGGC CGCCGATACG
GACCGGTCGC GCGTGCGTCA TCCCGACGGC AGCGAGGGCT TCTTTCAGAT CCGCATCGAA
GCGCAGCGCA CGACAGTGCC GTTCCGTAGC CCGTTCGAGC ACGCGAAGCC GCCGATGCAT
CTGCAATCGG CGATCGTCGT CGCGCCGCAA GGCGAAGAAG TCCATACGGA CGAGCTCAAC
CGCGTCAAGG TCCGCTTTCA CTGGGACCGC TTGAACGACG GCGACGAAAA GGCGTCGTGC
TGGCTGCGTG CCACGGCGTC CGATTCGGGC AATGGCTACG GTGCCGTCCA CCCGCACCGC
AGCGGCGAGG AAGTGCTGGT CGACTTCCTC GGCGGCGACT GCGATCGGCC GATCATCGTC
GGCAAGGTCT ACAACGGCGC GACGAGCCCG CAATGGCACA GCAACGGCAT CCTGTCCGGG
TACCGGTCCA AGGAATACGC GGGTGCCGGC TACAACCAGC TGGTGCTCGA CGACGCGACG
TCGCAGAACC GCGTGCACCT GTACAGCAGC CAGGCCAACA CGCACCTGCA CCTCGGCTAC
CTGATCGACC ACACGGGTAA CAACCGCGGC AGCTATCTCG GCAGTGGCTT CGACCTGCGC
TCGGACGCCT ACGGCGCCGT GCGCGCGAAC CGCGGGCTGT ACGTCACGAC GCATCCCAAG
CAGGCGGCCA GCCAGCCGCT CGACGTCGAC GAGACCCGGG AGCAGCTCGT GCGCGCGCAA
GGGCTGATCG ACGCCATGTC GCAGGTCAGC GCGCAGCATC AGGGCGAGTC GCTCGACCCC
GGCCATACGG CGCTGAAGCA GTTCAGCGAC TCGACGCAGA ACAGCGTGAG CGGCAGCGCG
TCGGGCGGCC GGACCGCCGG CGGCGGAACC GGCAACGCCA ACGCGTTCAA GGAGCCCGTG
ATGCTGTTCG GCAGCCCGGC CGGCATCGGG ATGTCCACGC AGCAGTCCGC GCAATTTTCC
GCGGACCAGC ACATCAACCT CGTCAGCGGG CAAAGCACGC ACGTCGCCGC CGGGAAATCG
CTGATCGCCA GTGTCCTCGA CCGGATCAGC CTGTTCGCGC AGAACGCGGG GATGAAGCTG
TTCGCCGGCA AGGGCAAGGT CGAAGTGCAG GCGCAGGCGG ACAACATCGA GCTGACCGCG
CAGAAGGCGC TGAAGCTGAT CGCCGTCACG CAATCGATCG AAGGCGCCGC GGCGAAGGAG
ATCCTGTTGA CGTCCGGCGG CGCCTATATC CGCATCGCGG ACGGCAACAT CGAGGTGCAC
GCGCCCGGCA AGATCGACAT CAAGGGCGCG CAGCATGCGT TCAGCGGCCC CACCCACCTG
TCGCAAACGA TGCCGACGCT GCCGAACTCC AACGGCAACT ACGACCAGGC GTTCATCGCG
CACTGGGCCG GCACCGACAT TCCGGTCGCG AACACGCGGT ACCAGATGTT CTCGAACGGC
AAGCTGCTCT CCGAAGGCGT CACCAACGCG GCAGGCGAAA CCGGGCTCAC GCAGAGCCAC
GTGCCGCACG ACGTCGTGGT CAAGTTTCTA GGGAAATCGA ATGGCTGA
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| Protein sequence | MNSQALRSAL LAGPVQHERL IKLDTPLGPD VLLPQRVTGR SRLGRHFEFT VDTVSVSDDL
ELKKLIAQPV TLWIQQADQS YAPHHGYVHA ARRLGSDSGV AHHQIVFASF LHFLKFRRDQ
RIWQDRSADD IIADVLNQHP QAKGRFTFKL YQPLPSRSFC MQYEDDWNFV HRLMESEGLY
GFWEQDSDGK SHRLVIVDRI DALPALSPRT VRFHHAGTGD EADTLVQFTG TRTLRSVART
TRTFDYKQPP TASNPKATHT PTIANQGDLP QQLEVYEYTG AYTYPEQSRG DHLSKIWMEE
QESHAKRFHG VGGVRRMDAG RVFEFAEHPE HDKDDAGQRE FAVIETAWVI VNNLPVADEP
AVFPHSLQAE IGSIMQAADT DRSRVRHPDG SEGFFQIRIE AQRTTVPFRS PFEHAKPPMH
LQSAIVVAPQ GEEVHTDELN RVKVRFHWDR LNDGDEKASC WLRATASDSG NGYGAVHPHR
SGEEVLVDFL GGDCDRPIIV GKVYNGATSP QWHSNGILSG YRSKEYAGAG YNQLVLDDAT
SQNRVHLYSS QANTHLHLGY LIDHTGNNRG SYLGSGFDLR SDAYGAVRAN RGLYVTTHPK
QAASQPLDVD ETREQLVRAQ GLIDAMSQVS AQHQGESLDP GHTALKQFSD STQNSVSGSA
SGGRTAGGGT GNANAFKEPV MLFGSPAGIG MSTQQSAQFS ADQHINLVSG QSTHVAAGKS
LIASVLDRIS LFAQNAGMKL FAGKGKVEVQ AQADNIELTA QKALKLIAVT QSIEGAAAKE
ILLTSGGAYI RIADGNIEVH APGKIDIKGA QHAFSGPTHL SQTMPTLPNS NGNYDQAFIA
HWAGTDIPVA NTRYQMFSNG KLLSEGVTNA AGETGLTQSH VPHDVVVKFL GKSNG
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