Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2560 |
Symbol | |
ID | 6124224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2858402 |
End bp | 2859838 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641639153 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001765843 |
Protein GI | 170733896 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0115915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAAC GCCCGCCCGC CGCCGCTCCC GGCGAAAAGA ACCTCACCGT GATGCTCTGG CTCGTTGCGA CGGGCTTCTT CATGCAGACG CTCGACGCGA CGATCGTCAA CACGGCGCTG CCGTCGATGG CCGCGAGCCT CGGCGAATCG CCGCTGCGGA TGCAATCGGT CGTGATCGCG TATTCGCTGA CGATGGCGGT GATGATCCCC GTGTCGGGCT GGCTCGCCGA TACGTTCGGC ACGCGGCGCG TGTTCTTCAG CGCGATCCTG GTGTTCTCGC TCGGCTCGCT GCTGTGCGCG AACGCGCACA CGCTGACGCA GCTCGTCGCG TTCCGCGTGG TGCAGGGGGT CGGCGGCGCG ATGCTGCTGC CGGTCGGGCG GCTCGCGGTG CTGCGCACCT TCCCGGCCGA ACGCTACCTG CCCGCGCTGT CGTTCGTCGC GATTCCGGGC CTCATCGGCC CGCTGATCGG GCCGACGCTC GGCGGCTGGC TCGTGAAGAT CGCGTCGTGG CACTGGATCT TCCTGATCAA CGTGCCGGTC GGCGTCGCGG GCTGCATCGC GACCTTCTAT TCGATGCCCG ACTCGCGCAA CCCGGCCGCC GGCCGCTTCG ACCTGAAGGG CTATCTGCTG CTGACGATCG GCATGGTCGC GATCTCGCTG TCGCTCGACG GGCTCGCCGA TCTCGGCATG CAGCACGCGG CCGTGCTGGT GCTGCTGATC CTGAGCCTCG CGTGCTTCGT CGCGTACGGG CTGTACGCGG TGCGCGCGCC GCAGCCGATC TTCTCGCTGG AGTTGTTCAA GATCCACACG TTCAGCGTCG GGCTGCTCGG CAACCTGTTC GCGCGGATCG GCAGCGGCGC GATGCCGTAC CTGATCCCGC TGCTGCTGCA GGTGAGCCTC GGCTACTCGG CGTTCGAGGC CGGGCTGATG ATGCTGCCGG TCGCGGCGGC CGGCATGTTC TCGAAGCGGA TCATCACGCG GCTGATCACG CAGCACGGCT ACCGCAAGGT GCTGCTCGCG AACACGATCA TGGTCGGCGT GATGATGGCG AGCTTCGCGC TGATGCGCGA CACGGTGCCG GTGTGGGTGA AGGTCGTGCA TCTCGCGCTG TTCGGCGGCT TCAACTCGAT GCAGTTCACC GCGATGAACA CGCTGACGCT GAAGGATCTC GGCACCGGCG GCGCGAGCAG CGGCAACAGC CTGTTCTCGC TCGTGCAGAT GCTGTCGATG AGCCTCGGCG TCACGGTCGC CGGCGCGCTG CTCGCAACGT TCACCGGCAT GCTGCGCACC GTGACGCCGA GCAACACGCT GCCGGCGTTC CATGCGACCT TCGTCTGCGT CGGGATCATC ACGGCCGCGT CCGCGTGGAT CTTCGCGCAG CTCGCGCCGG AGATCCGCAG CACCGCGCGC AAGACCGACC CGTCCGAGCG CGCGTGA
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Protein sequence | MFQRPPAAAP GEKNLTVMLW LVATGFFMQT LDATIVNTAL PSMAASLGES PLRMQSVVIA YSLTMAVMIP VSGWLADTFG TRRVFFSAIL VFSLGSLLCA NAHTLTQLVA FRVVQGVGGA MLLPVGRLAV LRTFPAERYL PALSFVAIPG LIGPLIGPTL GGWLVKIASW HWIFLINVPV GVAGCIATFY SMPDSRNPAA GRFDLKGYLL LTIGMVAISL SLDGLADLGM QHAAVLVLLI LSLACFVAYG LYAVRAPQPI FSLELFKIHT FSVGLLGNLF ARIGSGAMPY LIPLLLQVSL GYSAFEAGLM MLPVAAAGMF SKRIITRLIT QHGYRKVLLA NTIMVGVMMA SFALMRDTVP VWVKVVHLAL FGGFNSMQFT AMNTLTLKDL GTGGASSGNS LFSLVQMLSM SLGVTVAGAL LATFTGMLRT VTPSNTLPAF HATFVCVGII TAASAWIFAQ LAPEIRSTAR KTDPSERA
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