| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2548 |
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| Symbol | |
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| ID | 6124212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2842168 |
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| End bp | 2844396 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641639141 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001765831 |
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| Protein GI | 170733884 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00891697 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000308445 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCACTT CGCCCAAGAT TATCTACACC CTCACCGACG AAGCGCCGGC GCTCGCGACC
TACTCGCTGC TGCCGATCGT CAAGGCCTTC ACGCGTTCGT CCGGCGTCGC CGTCGAAACG
CGCGACATCT CGCTCGCCGG CCGCATCATC GCGGCATTCG CAGACGTCCT GCCGTCGGAG
CAGAAGGGTT CCGACGATCT GGCCGAACTG GGTCAGCTCA CGCTGAAGCC GGAAGCGAAC
ATCATCAAGC TGCCGAACAT CAGCGCATCG GTGCCGCAGC TGAAGGCCGC GATCGCCGAG
CTGCAGGCGC AGGGCTATGC GCTGCCGGCC TATCCGGAAG ATCCGTCGAC CGACGAAGAG
AAGGCCGTCA AGGCGCGCTA CGACAAGATC AAGGGCAGCG CGGTGAACCC GGTGCTGCGC
GAAGGCAACT CCGACCGCCG CGCGCCGCTG TCGGTCAAGA ACTACGCACG CAAGCATCCG
CACAAGATGG GCGCGTGGAA AGCCACGTCG AAGGCGCACG TCGCGCACAT GACCGAAGGC
GACTTCTACG GCAGCGAGAA ATCGGCGCTG ATCGCCGATG CCGGCAGCGT GAAGATCGAA
CTCACGACGA CCGACGGCGC GAAGAAGGTG CTGAAGGAAA AGACGGCCGT GAAGGCCGGT
GAAGTGATCG ACGCATCGGT GATGAGCCGC AATGCGCTGC GCAGCTTCAT CGAAGCGCAG
ATCGCCGACG CGAAGGCGCA GGACGTGCTG TTCTCGGTGC ACCTGAAGGC GACCATGATG
AAGGTCTCGG ACCCGATCCT GTTCGGTCAC TTCGTGTCGG TGTTCTACCG CGATGCGCTC
GCGAAGCATG CGGACGTGCT GGCGAAGGCC GGCTTCAACC CGAACAACGG GATCGGCGAC
CTGTACGCGC GCCTGAAGGA CCTGCCGGCC GATACGCGCG AAGCGATCGA AGCCGACGTC
AAGGCAGAGT ACGCGGTGCG TCCGCGCCTC GCGATGGTCA ACTCGGACAA GGGCATCACG
AACCTGCACG TGCCGAGCGA CGTGATCGTC GACGCATCGA TGCCGGCGAT GATCCGCGAT
TCGGGCGGCA TGTGGGGCCC GGACGGTCAG CTGTACGACG CGAAGGCCGT GATTCCGGAC
CGCTGCTACG CGGGCGTCTA CCAGGCCGTG ATCGAGGACT GCAAGCAGCA CGGCGCGTTC
GATCCGGTCA CGATGGGCAG CGTGCCGAAC GTCGGCCTGA TGGCGCAGGC GGCCGAGGAA
TACGGTTCGC ACGACAAGAC GTTCCAGATC CCGGCGGACG GCGTCGTGCG CGTCATCGAC
GAAGCCGGCA ACGTGCTGCT CGAGCACGCG GTCGAGTCGG GCGACATCTG GCGCATGTGC
CAGACGAAGG ACGCACCGGT GCAGGACTGG GTCAAGCTCG CGGTCAACCG TGCCCGCGCG
ACGGGCGCCC CGGCCGTGTT CTGGCTCGAC CCGGCGCGCG CGCACGATGC GCAGATCATC
GAGAAGGTCG AACGCTACCT GAAGGATCAC GACACGAACG GCCTCGACAT CCGCATCATG
ACGCCGGTCG ATGCCACGCG TTTCTCGCTC GAGCGCATCC GCGCGGGCAA GGACACGATT
TCGGTCACCG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTC
GGCACCAGCG CGAAGATGCT GTCGATCGTG CCGCTGATGG CCGGCGGCGG GATGTTCGAA
ACGGGTGCGG GCGGCTCCGC GCCGAAGCAC GTGCAGCAGT TCGTCGAGGA AGGCTTCCTG
CGCTGGGATT CGCTCGGCGA ATTCCTCGCG CTGGCCGCGT CGCTCGAACA CCTCGGCAAC
GCTTATCAAA ACCCGAAGGC GCTCGTGCTC GCGAAGACGC TCGACCAGGC GACCGGCAAG
TTCCTGGACG AGAACAAGTC GCCGGCGCGC AAGGTCGGTG GTCTCGACAA CCGCGGCAGC
CACTTCTACC TGTGCCTGTA CTGGGCCCAG GCGCTGGCCG AGCAGACCGA CGACGCCGCG
CTGAAGGCGC AGTTCGAGGG TGTCGCGAAG GCGCTGTCCG ACAACGAGGC GCGCATCCTG
GAAGAACTGG CGGCCGCGCA AGGCAAGCCG CAGGCGATCG GCGGCTACTA CCGTCCGAAC
GTCGAGTTGA CGAGCCAGGC CATGCGCCCG AGCGCGACGC TGAACGGCAT CGTCGACGCG
CTCGCCTGA
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| Protein sequence | MSTSPKIIYT LTDEAPALAT YSLLPIVKAF TRSSGVAVET RDISLAGRII AAFADVLPSE
QKGSDDLAEL GQLTLKPEAN IIKLPNISAS VPQLKAAIAE LQAQGYALPA YPEDPSTDEE
KAVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWKATS KAHVAHMTEG
DFYGSEKSAL IADAGSVKIE LTTTDGAKKV LKEKTAVKAG EVIDASVMSR NALRSFIEAQ
IADAKAQDVL FSVHLKATMM KVSDPILFGH FVSVFYRDAL AKHADVLAKA GFNPNNGIGD
LYARLKDLPA DTREAIEADV KAEYAVRPRL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD
SGGMWGPDGQ LYDAKAVIPD RCYAGVYQAV IEDCKQHGAF DPVTMGSVPN VGLMAQAAEE
YGSHDKTFQI PADGVVRVID EAGNVLLEHA VESGDIWRMC QTKDAPVQDW VKLAVNRARA
TGAPAVFWLD PARAHDAQII EKVERYLKDH DTNGLDIRIM TPVDATRFSL ERIRAGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQFVEEGFL
RWDSLGEFLA LAASLEHLGN AYQNPKALVL AKTLDQATGK FLDENKSPAR KVGGLDNRGS
HFYLCLYWAQ ALAEQTDDAA LKAQFEGVAK ALSDNEARIL EELAAAQGKP QAIGGYYRPN
VELTSQAMRP SATLNGIVDA LA
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