Gene Bcenmc03_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2524 
SymbolispH 
ID6124188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2815525 
End bp2816505 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content67% 
IMG OID641639117 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_001765807 
Protein GI170733860 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCA CCGATACGCT GTCCGGGCAG ACCGTCGCCG CCGACGCCGA AATCCTGCTG 
GCCCAGCCGC GCGGTTTCTG CGCGGGCGTC GACCGCGCGA TCGAGATCGT CGAGCGCGCC
ATCGCGATGC ACGGTGCGCC GATCTACGTG CGTCACGAAA TCGTCCACAA CAAGTACGTG
GTCGAGGATC TGAAGAAGAA GGGCGCGATC TTCGTCGAGG AACTCGAGGA AGTGCCGGCC
GGCAACACCG TGATCTTCAG CGCGCACGGC GTGTCGAAGG CCGTGCGCGA CGAGGCCGAC
GTGCGCGGGC TGCGCATTTA CGACGCAACC TGCCCGCTCG TCACGAAGGT GCACGTCGAA
GTGGCGAAGA TGCGCCAGGA CGGTGTCGAC ATCGTCATGA TCGGGCACAA GGGCCATCCC
GAAGTGGAGG GCACGATGGG CCAGGTCGAG CGCGGCATGC ACCTCGTCGA AAGTGTCGAG
GACGTGCAGA AGCTCGAGCT CGCCGATCCC GAGCGCATCG CGCTCGTCAC GCAGACGACG
CTGTCCGTCG ACGACGCGGC CGAGATCATC GGCGCGCTGA AGGCGAAGTA TCCGAAGATC
CGCGAGCCGA AGAAGCAGGA CATCTGCTAC GCGACGCAGA ACCGCCAGGA CGCGGTGAAG
TTCATGGCGC CGCAATGCGA CGTCGTGATC GTGGTCGGTA GTCCGAACAG CTCGAACTCG
AGCCGGCTGC GCGAAGTGGC CGAAAAGCGC GGCGTGGCCG CGTACATGGT CGATGCACCG
GACCAGATCG ATCCGGCATG GGTCGCCGGC AAGCGCCGCA TCGGCGTGAC GGCTGGTGCG
TCGGCGCCCG AGGTGCTCGC CCAGGCTGTG ATCGCGCGCC TGCGCGAACT CGGGGTGCGC
AACGTCCGCG CACTCGACGG CATCGAGGAA AACGTGTCGT TTCCGCTGCC GCGCGGGTTG
AACCTGCCGC CCGCCGCCTG A
 
Protein sequence
MSTTDTLSGQ TVAADAEILL AQPRGFCAGV DRAIEIVERA IAMHGAPIYV RHEIVHNKYV 
VEDLKKKGAI FVEELEEVPA GNTVIFSAHG VSKAVRDEAD VRGLRIYDAT CPLVTKVHVE
VAKMRQDGVD IVMIGHKGHP EVEGTMGQVE RGMHLVESVE DVQKLELADP ERIALVTQTT
LSVDDAAEII GALKAKYPKI REPKKQDICY ATQNRQDAVK FMAPQCDVVI VVGSPNSSNS
SRLREVAEKR GVAAYMVDAP DQIDPAWVAG KRRIGVTAGA SAPEVLAQAV IARLRELGVR
NVRALDGIEE NVSFPLPRGL NLPPAA