Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2453 |
Symbol | cobD |
ID | 6124117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2747059 |
End bp | 2747997 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641639044 |
Product | cobalamin biosynthesis protein |
Protein accession | YP_001765736 |
Protein GI | 170733789 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.393352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCGC TGCCCGTCGT CGCGATGCTC GCGGTCGCGG CCGCGCTCGT CGACCGCGCC ATCGGCGAGC CGGCCGGCTG GCATCCGCTC GTCGCGTTCG GCCGCTTCGC CGCGCGCATC GAAGCCGCAC TGAACACGGG CCGGCGCGGC CGCGTGATCG GCGTCGCCGC GTGGCTCGCG GCGGTCGTGC CGCCGGTGGC CGTCGCGGCA TGGCTCGTCG CCGTGCTGCC CTGGCCGTTC GCCGCAGCGC TGCACGTCGC GCTGCTGTGG TTCGCGCTCG GCGCGAAGAG CCTCGCCGAC CACGTCGCGC CGATCGCCGC CGCGCTGCTG CGGCGCGACC TCGACGCGGC GCGCACGCTG ACCGCGCGCA TCGTGTCGCG CGACACGAGC CAGGCGGACG AAGGGGCGCT GTCGCGCGCG GCCGTCGAAT CGGCGCTCGA GAACGGCAAC GACGCGATCT TCGGCGCGCT CTTCTGGTTC GTCGTCGCGG GCGGCCCCGG CGCGCTGCTG TTCCGGCTCG CGAACACGCT CGACGCGATG TGGGGCTACC GCACGCCGCG CTTCCTGACC TTCGGCTGGG CCGCCGCACG CATCGACGAC GCGCTGAACT GGATTCCCGC GCGGCTCACC GCCGCGAGCT ACGCGCTGCT CGGCGACACG GCCGCCGCGT GGCGCTGCTG GCGCACGCAG GCGCGCCACT GGGACAGCCC GAACGCGGGC CCCGTGATGG CCGCGGGCGC CGGCAGCCTG AACGTGCAGC TCGGCGGCCC GGCCGTCTAT CACGGCGAAA TCGAGGATCG CCCGGTGCTC GGCACCGGGG CCACGGCCAC CGCCCTTCAC ATCGTCGCCG CGTTGTCGCT CGTCACGCGC ACGCTTGCAC TGTGGCTCGC GTTGCTGGTC GCGAGCGGCG CACTCGTCAT GGCCACCCAT CATGTCTGA
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Protein sequence | MLSLPVVAML AVAAALVDRA IGEPAGWHPL VAFGRFAARI EAALNTGRRG RVIGVAAWLA AVVPPVAVAA WLVAVLPWPF AAALHVALLW FALGAKSLAD HVAPIAAALL RRDLDAARTL TARIVSRDTS QADEGALSRA AVESALENGN DAIFGALFWF VVAGGPGALL FRLANTLDAM WGYRTPRFLT FGWAAARIDD ALNWIPARLT AASYALLGDT AAAWRCWRTQ ARHWDSPNAG PVMAAGAGSL NVQLGGPAVY HGEIEDRPVL GTGATATALH IVAALSLVTR TLALWLALLV ASGALVMATH HV
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