| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2322 |
|---|
| Symbol | |
|---|
| ID | 6123986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2594816 |
|---|
| End bp | 2595286 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641638911 |
|---|
| Product | rRNA large subunit methyltransferase |
|---|
| Protein accession | YP_001765605 |
|---|
| Protein GI | 170733658 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.810756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.749932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTT TCATCCTCGC GGTCGGTCAC AAGATGCCCG GCTGGATCGC ATCCGGCTTC
GACGAATACA CGAAGCGGAT GCCGCCCGAA CTGCGCATCG AGTTGCGCGA AATCAAGCCT
GAACTGCGTT CGGGCGGCCG CAGCGCCGAA AGCGTGATGG CCGCCGAGCG GCAGAAGATC
GAGGCCGCGC TGCCGAAGGG CGCGCGCCTC GTCGCGCTCG ACGAGCGCGG CCGCGACTGG
ACCACGATGC AGCTCGCGCA GGCGCTGCCC GGCTGGCAAC AGGACGGCCG CGACGTCGCG
TTCGTGATCG GCGGCGCCGA CGGGCTCGAT CCGGACCTGA AAGCGCGCGC CGACGTGCTG
CTGCGCATCT CGAGCATGAC GCTGCCGCAC GGCATGGTGC GCGTGCTGCT CGCCGAACAG
CTTTACCGTG CGTGGAGCAT CACGCAGAAT CACCCCTACC ACCGCGCATG A
|
|---|
| Protein sequence | MKLFILAVGH KMPGWIASGF DEYTKRMPPE LRIELREIKP ELRSGGRSAE SVMAAERQKI
EAALPKGARL VALDERGRDW TTMQLAQALP GWQQDGRDVA FVIGGADGLD PDLKARADVL
LRISSMTLPH GMVRVLLAEQ LYRAWSITQN HPYHRA
|
|---|
| |