| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2277 |
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| Symbol | |
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| ID | 6123941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2547600 |
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| End bp | 2549747 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641638866 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001765560 |
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| Protein GI | 170733613 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000289568 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.091907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGT TCAACAAGGT CGTGAAGGAA TTCCAGTGGG GCCAGCACAA GGTGCGCCTC
GAAACCGGTG AAGTCGCCCG CCAGGCGAGC GGCGCCGTGA TCGTCGACGT CGAAGACACC
GTCGTGCTGG CAACCGTCGT CGGCGCGAAG TCGGCGAAGC CGGGTCAGGA TTTCTTCCCG
TTGACCGTCG ACTACCTCGA GAAGACCTAC TCGGCCGGCA AGATCCCGGG CGGCTTCTTC
CGCCGCGAAG GCCGTCCGTC GGAGCACGAG ACGCTGACGT CGCGCCTGAT CGACCGTCCG
CTGCGCCCGC TGTTCCCGGA AGGCTTCTAC AACGAAGTCC AGGTCGTGAT CCACGTGCTG
TCCGTGAACC CGGAAATCCC GGCCGACATC CCCGCGCTGA TCGGCGCATC GGCCGCGCTC
GCCGTGTCGG GCCTGCCGTT CAACGGCCCG GTCGGTGCCG CACGCGTGGC ATACATCGAC
AACGCATACG TGCTGAACCC GACGCGTGAC CAGCTCAAGG CATCGAGCCT CGACCTCGTC
GTCGCGGGTA CGGAGCGCGC CGTGCTGATG GTCGAGTCGG AAGCCGACCA ACTGTCGGAA
GAAGTGATGC TGGGCGCCGT GGTGTTCGGC CACGAGCAGA TGCAGATCGC GATCGACGCG
ATCCACGAAC TGGTGCGCGA CGGCGGCAAG CCCGAGTGGG ACTGGCAGCC GGCGGCGAAG
AACGAGGCGC TGATCGCACG CGTGACCGAG CTGGCGCAGA ACGATCTGCT CGCCGCTTAC
CAGCTCCGCG ACAAGCAGGC GCGTTCGGCA AAGCTGAAGG AAGTCTATGC GGCAACCTCG
GCGAAGCTCG AGGAAGACGC GCTGGCGGCC GGTACGGTCG CGGCCGACAA GGCCACGGTC
GGCAACGTGC TGTTCGACAT CGAAGCGAAG ATCGTCCGTT CGCAGATCCT GAACGGCGAG
CCGCGCATCG ACGGCCGCGA CACGCGCACC GTGCGTCCGA TCGAAATCCG CACCGGCGTG
CTGCCGCGTA CCCACGGCTC GGCACTGTTC ACGCGCGGCG AGACGCAGGC GCTGGTCGTC
GCGACGCTCG GCACGAAGGG TGACGAGCAG ATCATCGACG CGCTCGAAGG CGAATACCGC
GAGCGCTTCA TGCTCCACTA CAACATGCCC CCGTTCGCGA CCGGCGAAAC GGGCCGCGTC
GGCTCGCCGA AGCGCCGCGA AATCGGCCAC GGCCGGCTGG CCAAGCGCGC GCTGGTCAAG
TGCCTGCCGA GCGCCGACGA ATTCGGCTAC TCGATCCGCG TCGTGTCGGA AATCACCGAG
TCGAACGGTT CGTCGTCGAT GGCTTCGGTA TGCGGCGGCT GCCTCGCGCT GATGGACGCC
GGCGTGCCGA TGAAGGCGCA CGTCGCGGGT ATCGCGATGG GCCTGATCCT CGAAGGCAAC
AAGTTCGCGG TGCTGACCGA CATCCTCGGC GACGAAGATC ACCTCGGCGA CATGGACTTC
AAGGTGGCCG GCACGGAGCA GGGCGTGACG GCGCTGCAGA TGGACATCAA GATCCAGGGC
ATCACGAAGG AAATCATGCA GGTCGCGCTC GCGCAGGCGA AGGAAGGCCG CCTGCACATC
CTCGGCAAGA TGACGTCGGC GGTGTCGGGT GCGAACACGC AACTGTCGGA ATTCGCGCCG
CGCATGATCA CGGTCAAGAT CAACCCGGAA AAGATCCGCG ACGTGATCGG CAAGGGCGGT
TCGGTGATCC GCGCGCTGAC GGAAGAAACG GGCACGACCA TCGACATCTC GGATGACGGC
GTCGTGACGA TCGCCAGCAC GAGCAGCGAA GGCATGGCCG AAGCGAAGAA GCGCATCGAG
CAAATCACGG CCGAGATCGA AGTCGGTCAG GTGTACGAAG GCACGGTGCT CAAGCTGCTC
GATTTCGGCG CGATCGTGAA TCTGCTGCCG GGCAAGGATG GCCTGCTGCA CATCTCGGAA
ATCGTCAACG AGCGCGTGAA GGACATCAAC GACTACCTGA AGGAAGGTCA GCAGGTGAAG
GTCAAGGTGA TCCAGACGGA CGAGAAGGGT CGCGTGCGTC TGTCGGCCAA GGCGCTGCTG
AATGAAGCAG CGGCGGCAGC GCAGTCGGAT ACGCCGCCGC AGCAGTAA
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| Protein sequence | MSMFNKVVKE FQWGQHKVRL ETGEVARQAS GAVIVDVEDT VVLATVVGAK SAKPGQDFFP
LTVDYLEKTY SAGKIPGGFF RREGRPSEHE TLTSRLIDRP LRPLFPEGFY NEVQVVIHVL
SVNPEIPADI PALIGASAAL AVSGLPFNGP VGAARVAYID NAYVLNPTRD QLKASSLDLV
VAGTERAVLM VESEADQLSE EVMLGAVVFG HEQMQIAIDA IHELVRDGGK PEWDWQPAAK
NEALIARVTE LAQNDLLAAY QLRDKQARSA KLKEVYAATS AKLEEDALAA GTVAADKATV
GNVLFDIEAK IVRSQILNGE PRIDGRDTRT VRPIEIRTGV LPRTHGSALF TRGETQALVV
ATLGTKGDEQ IIDALEGEYR ERFMLHYNMP PFATGETGRV GSPKRREIGH GRLAKRALVK
CLPSADEFGY SIRVVSEITE SNGSSSMASV CGGCLALMDA GVPMKAHVAG IAMGLILEGN
KFAVLTDILG DEDHLGDMDF KVAGTEQGVT ALQMDIKIQG ITKEIMQVAL AQAKEGRLHI
LGKMTSAVSG ANTQLSEFAP RMITVKINPE KIRDVIGKGG SVIRALTEET GTTIDISDDG
VVTIASTSSE GMAEAKKRIE QITAEIEVGQ VYEGTVLKLL DFGAIVNLLP GKDGLLHISE
IVNERVKDIN DYLKEGQQVK VKVIQTDEKG RVRLSAKALL NEAAAAAQSD TPPQQ
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