| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2275 |
|---|
| Symbol | tpiA |
|---|
| ID | 6123939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2545536 |
|---|
| End bp | 2546291 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641638864 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_001765558 |
|---|
| Protein GI | 170733611 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000308196 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.102184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC AACGAACAAA GCGAGTGATC GGCAACTGGA AGATGCACGG CCGGCTGGCC
GGCAACCAGG CGCTGCTGAA CGAAGTGGTG CAGGGCGCGG GCACGGTGGC GGCTGAAACG
TCGATCGGCG TGTGCGTGCC GTTCCCGTAT CTCGCGCAGG TTCAGGCGCA GCTCGGCGAT
GGCCGTGTCG CGTTCGGTGC GCAGGACGTG TCCGCACACG AGCAAGGCGC GTTCACCGGT
GAGGTGGCGG CGGCGATGGT GGCGGAGTTC GGCGCGCGGT ATGCGATCGT CGGTCACTCG
GAGCGTCGCG CGTATCACGG CGAAAGCAAC GAGACGGTCG CGGCGAAGAC GCAGCGCGCG
CTCGCGGCCG GCCTCGTGCC GGTCGTGTGT GTCGGCGAGA CGCTCGACGA GCGCGAGTCG
GGTGCGACCG AGCAGGTCGT CGGTGCGCAG CTCGACGCGG TGCTGGCCGT GCTGACGGCT
GACGAGGCCG CGCGTATCGT CGTCGCGTAC GAGCCGGTCT GGGCGATCGG CACGGGCAAG
AGCGCGACGT CGGCGCAGGC GCAGGACGTG CATGCGTTCC TGCGGACGCG TCTCGCGGCA
AAGGGTGCGG CGGACGTGTC CGTGCTGTAC GGCGGCAGCG TGAAGCCGGA CAACGCGGAA
GAGCTGTTCG CGCAACCGGA CATCGACGGC GGCCTGATCG GCGGCGCGTC GCTGAAGGCG
GAAGATTTCC TGGCGATCTG CCGGGCCGCG CGTTGA
|
|---|
| Protein sequence | MSKQRTKRVI GNWKMHGRLA GNQALLNEVV QGAGTVAAET SIGVCVPFPY LAQVQAQLGD
GRVAFGAQDV SAHEQGAFTG EVAAAMVAEF GARYAIVGHS ERRAYHGESN ETVAAKTQRA
LAAGLVPVVC VGETLDERES GATEQVVGAQ LDAVLAVLTA DEAARIVVAY EPVWAIGTGK
SATSAQAQDV HAFLRTRLAA KGAADVSVLY GGSVKPDNAE ELFAQPDIDG GLIGGASLKA
EDFLAICRAA R
|
|---|
| |