| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2223 |
|---|
| Symbol | |
|---|
| ID | 6123887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | + |
|---|
| Start bp | 2491731 |
|---|
| End bp | 2492411 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641638806 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_001765506 |
|---|
| Protein GI | 170733559 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0534609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCC GAGTGATCGT CGTCGCGGTC GGTGTGCTTG CCGCACACGC GATCATGCTG
ACGGCCGCGT GGCTCCATCG CAACGCGCCG CCGCCGAAAT CGGTCGAAGT CCAGACGATC
ACCGCGCAGC TCATCACGCC GGCGCCGATC GCGCAGCAGG TCGCGGCCGA GTCGATCCCG
CAGCCCGCGC CGCCGAAGCC CGTGCCTCGC GTGAAGCCCA AGGTCGAGCC GAAGCCGGTG
CAGAAGGCGG CGAAGCCGAC CCCGCAGCCG GTTGCGCCCT CGCCGGCCCC GTCGCCCACA
CCCGCGCCTG CCGCCGACCC AACGCCTGCT CCCGCCGCGC CCGCTCCCGC GGCACCAGCC
GCCACGCCGG GCCCGGCGCG CGAAACGATG CAGGTCAGCG CGCCGAAGAA CGTGCCGACG
CTCCAATGCA ACTTCGTGAA GCCCGACTAT CCGTCGATGT CGCGCCGCCG CGGCGAATCG
GGTACCGCCT ATGTTCACTT CGTCGTCGGC GTGACCGGCA AGATCGAAAG CATCGATCTG
CAGAAGAGCA GCGGCTATCC GCGCCTCGAC GATGCCGCAC TCGACGCGAT GCGCTCGACC
ACCTGCCGTC CGTACGTCGA GAACGGCCAG GCGATCCGCG CCGCCCGCAC ACAGCCCTAC
AGCTTCGGGC TCACCGACTA A
|
|---|
| Protein sequence | MNPRVIVVAV GVLAAHAIML TAAWLHRNAP PPKSVEVQTI TAQLITPAPI AQQVAAESIP
QPAPPKPVPR VKPKVEPKPV QKAAKPTPQP VAPSPAPSPT PAPAADPTPA PAAPAPAAPA
ATPGPARETM QVSAPKNVPT LQCNFVKPDY PSMSRRRGES GTAYVHFVVG VTGKIESIDL
QKSSGYPRLD DAALDAMRST TCRPYVENGQ AIRAARTQPY SFGLTD
|
|---|
| |