Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2219 |
Symbol | |
ID | 6123883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | + |
Start bp | 2487988 |
End bp | 2489511 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641638802 |
Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
Protein accession | YP_001765502 |
Protein GI | 170733555 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00489886 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCA TCAAACAGGA AGACCTGATC CAGAGCATCG CGGATTCGCT GCAGTACATC AGCTACTACC ACCCGCTCGA CTACATCCAG GCCCTCGGCC GCGCGTACGA GCTGGAAGAG AGCCCGGCGG CGAAGGACGC GATCGCGCAG ATCCTCACGA ACAGCCGCAT GTGCGCGGAA GGCAAACGTC CGATCTGCCA GGACACCGGC ATCGTGACGA TCTTCGTGAA GGTCGGCATG GACGTGCGCT GGGACGGCGC GACGATGGGC CTCACCGACA TGATCAACGA AGGCGTGCGC CGCGGTTACA CGCACCCGGA CAACGTGCTG CGCGCGTCGA TCGTCAATCC GCCGGAAGGC GCCCGCAAGA ACACGAAGGA CAACACGCCA GCCGTGATCC ACTACGAGAT CGTGCCGGGC GACAAGGTCG ACGTGCAGGT CGCGGCGAAG GGCGGCGGCT CGGAGAACAA GTCGAAGTTC GTGATGCTGA ACCCGTCCGA TTCGATCGTC GACTGGGTGC TGAAGACGGT CCCGACGATG GGCGCCGGCT GGTGCCCGCC GGGCATGCTC GGGATCGGCA TCGGCGGCAC CGCCGAGAAG GCGATGCTGA TGGCGAAGGA ATCGCTGATG GAGCCGATCG ACATCCAGGA AATCATCGCG CGCGGCCCGA AGGACTGGGT CGAGAAACTG CGCGTGGAAC TGCACGAGAA GGTCAACGCG CTCGGCATCG GCGCGCAGGG CCTCGGCGGC CTCGCAACCG TGCTGGACGT GAAGATCATG GCGGCGCCGA CGCACGCGGC ATCGAAGCCG GTCGCGCTGA TCCCGAACTG CGCGGCCACG CGCCACGCGC ACTTCGTGCT CGACGGGTCG GGCCCGGCCA AGTTGGAAGC GCCGTCGCTC GACGCCTGGC CGAAGGTGCA GTGGGAACCG AACACGGAAA CCAGCAAGCG CGTCGACCTG AACACGCTGA CGCCGGAAGA AGTCGCGAGC TGGACGCCGG GCCAGACGCT GCTGCTGTCG GGCAAGATGC TCACCGGCCG CGACGCCGCG CACAAGCGCA TCGCCGACAT GCTCGCGAAG GGCGAGAAGC TGCCGGTCGA TTTCACGAAC CGCGTGATCT ACTACGTCGG CCCGGTCGAT CCGGTGCGCG ACGAAGTGGT CGGCCCGGCC GGCCCGACGA CGGCCACGCG CATGGACAAG TTCACCGAGA CGATGCTCGC TCAGACGGGT CTGATCTCGA TGGTCGGCAA GGCCGAACGC GGCCCGGTCG CGATCGACGC GATCAAGAAG CACAAGGCGG CCTACCTGAT GGCGGTCGGC GGCGCGGCCT ACCTCGTGTC GAAGGCGATC CGCGGCGCGA AGGTGCTCGC GTTCGAAGAC CTCGGCATGG AAGCGATCTA CGAGTTCGAC GTGCAGGACA TGCCGGTGAC GGTCGCCGTC GATTCGTCGG GCACGTCGGT GCACCAGACG GGTCCGAAGG AATGGCAGGC GAAGATCGGC AAGATCCCGG TCGCCACCGC TTAA
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Protein sequence | MTVIKQEDLI QSIADSLQYI SYYHPLDYIQ ALGRAYELEE SPAAKDAIAQ ILTNSRMCAE GKRPICQDTG IVTIFVKVGM DVRWDGATMG LTDMINEGVR RGYTHPDNVL RASIVNPPEG ARKNTKDNTP AVIHYEIVPG DKVDVQVAAK GGGSENKSKF VMLNPSDSIV DWVLKTVPTM GAGWCPPGML GIGIGGTAEK AMLMAKESLM EPIDIQEIIA RGPKDWVEKL RVELHEKVNA LGIGAQGLGG LATVLDVKIM AAPTHAASKP VALIPNCAAT RHAHFVLDGS GPAKLEAPSL DAWPKVQWEP NTETSKRVDL NTLTPEEVAS WTPGQTLLLS GKMLTGRDAA HKRIADMLAK GEKLPVDFTN RVIYYVGPVD PVRDEVVGPA GPTTATRMDK FTETMLAQTG LISMVGKAER GPVAIDAIKK HKAAYLMAVG GAAYLVSKAI RGAKVLAFED LGMEAIYEFD VQDMPVTVAV DSSGTSVHQT GPKEWQAKIG KIPVATA
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