Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2188 |
Symbol | |
ID | 6123852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2444334 |
End bp | 2445029 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641638770 |
Product | histidine utilization repressor |
Protein accession | YP_001765471 |
Protein GI | 170733524 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.163062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCGC CGGTCTACCA GGAGATCAAG GATTTCATCC TGGCCCGCAT CCATGCCGGC GAGTGGGAGG AGGGCGACCA GGTGCCGTCC GAGAACGAGC TGGCGCGCGA GTTCAAGGTG GCGCGCATGA CCGTCAACCG CGCGCTGCGC GAGCTGACGG CCGAGCAGGT GCTCACGCGC ATGAAGGGCG CGGGCACCTA CGTCGCGCGG CCGAAGTACG AGTCGACGCT GGTGGCGATC CGCAGTATCT CCGAGGAAGT CGGTGCGCGC GGGCATGCGT ACCGCGCCAG CGTGCTCGGG CTCGACACGA TCCGCGCCGA CGAGGCCCTC GCCGACGAGA TGCAGGTGGC CGTGCGCACG AAGCTGTTTC ATTCGCAGGT GCTGCACTTC GAGAACGACG AGCCGGTGCA GCTCGAAGAA CGGTGGGTGA ATCCGGCGGT CGCGCCGGAT TACGCCGAGC AGGATTTCAC GAACACGACG CCGAACCAGT ACCTGATGCG CGCGGCGCCG CTGCAGCGCG TCGAGTACCG GATCGAAGCG GCGGCCCCGG CGCCGGAGCG GCGCGAGCAG CTGCGGATGG ACGGTGTCGA GCCGTGTCTG GTTTTACATC GGCGCACCTG GTCGCAGGGC GTCGTCGCCT CGGTGGCGAA TCTGTGGCAT CCCGGCAGCC GTTATCGCTT CACCGGGCAT TTCTGA
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Protein sequence | MSAPVYQEIK DFILARIHAG EWEEGDQVPS ENELAREFKV ARMTVNRALR ELTAEQVLTR MKGAGTYVAR PKYESTLVAI RSISEEVGAR GHAYRASVLG LDTIRADEAL ADEMQVAVRT KLFHSQVLHF ENDEPVQLEE RWVNPAVAPD YAEQDFTNTT PNQYLMRAAP LQRVEYRIEA AAPAPERREQ LRMDGVEPCL VLHRRTWSQG VVASVANLWH PGSRYRFTGH F
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