| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2172 |
|---|
| Symbol | |
|---|
| ID | 6123836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2420806 |
|---|
| End bp | 2421795 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641638753 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001765455 |
|---|
| Protein GI | 170733508 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3391] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.928709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACTT TCCTTTCCCT CGGCCGCACG CTCGCGCTGG CCGCCGCCGT CCTGGCGCCC
GCCGCCCACG CGAATAACGT GATCGTTCTC AACTCGGCCG AAGCGACGCT TTCCCTGATC
GACCAGCAGA CCCGCGAAGT CGTTTCCACG ATGCCGACCG GCAAGGAACC GCACCATTTG
ATGGCGACGC CCGACAATGC GTCGCTGATC GTTGCAAATT CGGTCTCGAA CAGCCTGATG
TTCCTCGATC CGAAGACGGG CAAGCTGCAG CGCACCGTCG AAGGGATCGA CGATCCTTAC
CAGCTCGGTT TCTCGCCCGA CCGCAAATGG TTCGCGGCGG CCGGCCTGCG GCTCGACCGC
GTCGACATCT ACGGCTACGA CGGCCGCGAC CTGAAGCTCG TGAAGCGCGT GCCGCTCGCG
GTGATGCCGA GCCACCTCGC GTTCACGAAG GACAGCAAGA CGCTGCTCGT GTCGCTGCAG
GTGTCCGGCG AGATCGCGGC GATCGACCTG CCCACGCAGA CGGTCAAATG GAAGATGAAG
GTCGGCAAGG TGCCGGCCGG CCTGTGGCTC ACGCCGGACG ACAAGTTCCT GCTCGTCGGG
ATGACCGGCG CGGATTACGT CGCGGTCGTC GACTGGCGCA ACCAGAAGGT CGTCAAGCAG
ATCTACACGG GCAAGGGCGC GCACAACTTC CGCTCGCTCG CCGACGGCAC GCACGTCGCG
GTGACGAACC GCGTCGCGAA CACGATCAGC ATCATCGACG AGAACACGCT CACCAACGTC
GGCGACATCA CCGGCCTGTT GCCGGGCCCC GACGACATGG AGCTGTCCGC CGACAAGAAG
ACGCTGTGGG TGACGTTCCG TTTCGCGAAG AAGGTCGGGA TCATCGACCT GGCCTCGCGC
AAGCTGGTGC AGACGATCGC CGTCGGCCGC TCGCCGCACG GCATCTACTT CTACGACCGC
GCGCCGTGGA GAGCGGCGAA CGGCGCGTGA
|
|---|
| Protein sequence | MRTFLSLGRT LALAAAVLAP AAHANNVIVL NSAEATLSLI DQQTREVVST MPTGKEPHHL
MATPDNASLI VANSVSNSLM FLDPKTGKLQ RTVEGIDDPY QLGFSPDRKW FAAAGLRLDR
VDIYGYDGRD LKLVKRVPLA VMPSHLAFTK DSKTLLVSLQ VSGEIAAIDL PTQTVKWKMK
VGKVPAGLWL TPDDKFLLVG MTGADYVAVV DWRNQKVVKQ IYTGKGAHNF RSLADGTHVA
VTNRVANTIS IIDENTLTNV GDITGLLPGP DDMELSADKK TLWVTFRFAK KVGIIDLASR
KLVQTIAVGR SPHGIYFYDR APWRAANGA
|
|---|
| |