Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2165 |
Symbol | |
ID | 6123829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2412791 |
End bp | 2414305 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641638746 |
Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
Protein accession | YP_001765448 |
Protein GI | 170733501 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.175856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.928709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGA TCTGGATAGT AGACGACGAC CAATCGATCC GCTGGGTGCT TGAAAAGGCA CTCGCCCGGG ACAGCTTCGC GACGAAGAGC TTCGCGAACG TGCGCGATGC GCTGGCCGCG CTCGACCACG AGACGCCGCA GGTGCTCGTG TCCGACATCC GGATGCCGGG CGGCTCGGGC CTCGAGTTGC TGCAGGCGAT GCACGAGCGG CTGCCGGGCC TGCCCGTCAT CATCATGACG GCGTTCTCCG ATCTCGACAG CGCCGTCGCG GCGTTCCAGG GCGGCGCGTT CGAATACCTC GCGAAGCCGT TCGACGTCGA CAAGGCGGTC GAGCTGATTC GCCGTGCAGT GGAAGAAAGC CTGCGTGGCG GCGCGCCGCA GGACGAGCGC GTGGCCGAGG CGCCCGAGAT GCTCGGCCAG GCGCCGGCGA TGCAGGACAT GTTCCGCGCG ATCGGCCGCT TGTCGCATTC GGCCGCGACC GTGCTGATCA CCGGCGAGTC GGGCACCGGC AAGGAGCTCG TCGCGCGGGC GCTGCACCGT CACAGCCCGC GTGCGAACGG ACCGTTCATC GCGCTGAACA CGGCGGCGAT TCCGAAGGAT CTGCTGGAAT CCGAACTGTT CGGCCACGAG CGCGGCGCGT TCACCGGCGC GCAGACGACG CGGCAGGGCC GCTTCGAGCA GGCCGAGAAC GGCACGCTGT TCCTCGACGA AATCGGCGAC ATGCCGTTCG ATCTGCAGAC GCGTCTGTTG CGCGTGCTGT CGGACGGGCA GTTCTACCGC GTCGGCGGGC ACAACCCGCT GCGCGCGAAC GTGCGCGTGA TCGCCGCGAC GCACCAGAAT CTCGAGTCGC GCGTGCGGCA GGGGCTGTTC CGCGAGGACC TTTACCACCG GCTCAACGTG ATCCGGCTGC GTCTGCCGCC GCTGCGCGAA CGCAGCGAGG ACATCGCGCT GCTCACGCGC CATTTCCTGC AGAAGAGCGC GCGCGATCTC GGCGTCGAGC CGAAGCGCGT GTCCGACGAC GCGCTCGCGT ACCTGACGTC GCTGCCGTTT CCCGGCAACG TGCGGCAGCT CGAGAATCTC GCGAACTGGC TGACCGTGAT GGCGCCCGCG CAGACGGTCG AGATCAAGGA TCTGCCGCCC GACCTCGTGC CGGCCGGTGC GCCGGTCGTC GCGACGGGCG ACGGCGCGGA CGCGCACGGC AGCGGCGGCC ACGCGGCCGC AGTGCCTGCC GCGATCGGTG CAGCGCCGAC GGCCGCGCCC GTCGCGAGCG CGGCGAACGG CAGCGCGCCG GCCGGCTACC CGCTGTGGGA GCACGGGCTG CGCACCGAAG TCGCGCGGCT GTTGCGCGAG AACTCGGCCG ACGTGATGGA CGAACTCGCT CGCCGCTTCG AAGCCGCCGT GATCCGCGAG GCGCTCGACT TCACGCGCGG TCGCAAGGTC GAGGCCGCGG AGCGGCTCGG CATCGGCCGC AACACGATCA CGCGCAAGAT CCAGGAACTC CATCTGGAGC CCTGA
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Protein sequence | MKPIWIVDDD QSIRWVLEKA LARDSFATKS FANVRDALAA LDHETPQVLV SDIRMPGGSG LELLQAMHER LPGLPVIIMT AFSDLDSAVA AFQGGAFEYL AKPFDVDKAV ELIRRAVEES LRGGAPQDER VAEAPEMLGQ APAMQDMFRA IGRLSHSAAT VLITGESGTG KELVARALHR HSPRANGPFI ALNTAAIPKD LLESELFGHE RGAFTGAQTT RQGRFEQAEN GTLFLDEIGD MPFDLQTRLL RVLSDGQFYR VGGHNPLRAN VRVIAATHQN LESRVRQGLF REDLYHRLNV IRLRLPPLRE RSEDIALLTR HFLQKSARDL GVEPKRVSDD ALAYLTSLPF PGNVRQLENL ANWLTVMAPA QTVEIKDLPP DLVPAGAPVV ATGDGADAHG SGGHAAAVPA AIGAAPTAAP VASAANGSAP AGYPLWEHGL RTEVARLLRE NSADVMDELA RRFEAAVIRE ALDFTRGRKV EAAERLGIGR NTITRKIQEL HLEP
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