Gene Bcenmc03_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_2144 
Symbol 
ID6123808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010508 
Strand
Start bp2384850 
End bp2385389 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID641638724 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001765427 
Protein GI170733480 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.86819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTCA CCACCAAAGG CCGTTTCGCC GTCACGGCGA TGATTGACTT GGCACTGCGC 
CAGGAGCAGG GCCCGGTGAC GCTTGCAGGC ATCAGCCAGC GCCAGCGGAT TTCGCTCTCG
TATCTCGAAC AGCTGTTCGG CAAGCTGCGC AGGCATGAAA TCGTCGAATC CGTGCGCGGC
CCGGGCGGCG GCTACAACCT CGCGCGTCGC GCGCAGGACG TCACCGTTGC CGACATCATC
ATCGCGGTCG ATGAACCGCT CGACGCCACG CAGTGCGGCG GCAAAGGCAC GTGCGACGGC
TCGAAGCAGC CCGACGGCCA TTGCATGACG CACGAGCTGT GGTCGACGCT GAACCAGAAG
ATGGTCGAAT ACCTCGATTC GGTGTCGCTG CAGGATCTCG TCGATCAGCA GCGCGCACGC
GAGGGCGCCC CCGCGGTGCT GCGCGACCGT CGCGCGCCGG AGCCCGTCGC CGCACCGGCC
GAGCCCGTGC GCACGATGCC GCTCGGCCCC AATTCGGTGT TCAACATCGC GAGTTCGTGA
 
Protein sequence
MRLTTKGRFA VTAMIDLALR QEQGPVTLAG ISQRQRISLS YLEQLFGKLR RHEIVESVRG 
PGGGYNLARR AQDVTVADII IAVDEPLDAT QCGGKGTCDG SKQPDGHCMT HELWSTLNQK
MVEYLDSVSL QDLVDQQRAR EGAPAVLRDR RAPEPVAAPA EPVRTMPLGP NSVFNIASS