Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2043 |
Symbol | |
ID | 6123707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2268798 |
End bp | 2269331 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641638615 |
Product | peptide deformylase |
Protein accession | YP_001765326 |
Protein GI | 170733379 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCG AGATCCTGAA GATGGGCGAT CCGCGCCTGC TCGAAATCGC CCAGCCGGTC GAGCGGTTCG ATACACCCGA GCTGCACGAG ATCGTCGCGG ACATGTTCGA GACGATGCAC CACGCGAACG GCGCGGGGCT CGCCGCGCCG CAGATCGGCA TCGGGCTGCA GATCATCATC TTCGGCTTCG GCAACAATAA CCGCTACCCG GATGCGCCGC CGGTGCCGGA GACCGTGCTG ATCAACCCGA AGGTCGAGTA CCTGCCGCCG GACATGGAAG AGGGCTGGGA AGGCTGCCTG TCGGTGCCGG GCATGCGCGG CGTCGTCAGC CGCTACGCGA AGGTGCGCTA CAGCGGCTTC GACCAGTTCG GCCAGAAGAT CGATCGTGTC GCCGAGGGGT TCCATGCGCG CGTGGTCCAG CATGAGTACG ATCACCTGAT CGGCAAGCTG TATCCGATGC GGATCACCGA TTTCACGCGC TTCGGTTTCA CCGAGGTGCT GTTCCCCGGG CTCGATCCGG CCGACGACGA CTGA
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Protein sequence | MIREILKMGD PRLLEIAQPV ERFDTPELHE IVADMFETMH HANGAGLAAP QIGIGLQIII FGFGNNNRYP DAPPVPETVL INPKVEYLPP DMEEGWEGCL SVPGMRGVVS RYAKVRYSGF DQFGQKIDRV AEGFHARVVQ HEYDHLIGKL YPMRITDFTR FGFTEVLFPG LDPADDD
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