Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_2029 |
Symbol | lpxD |
ID | 6123693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010508 |
Strand | - |
Start bp | 2251337 |
End bp | 2252431 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641638601 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001765312 |
Protein GI | 170733365 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.348896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTGA CGCTTGAGGA ACTCGTAAAA CGGTTCGGCG GCGAGATCGC CGGCGACGCA CAGTGCAAGG TGGGCGGGCT CGCACCGCTC GACCAGGCGG GCCCTCAGCA GCTCGCGTTC CTCGCGAACC CGAAGTACCT GTCGCAGGTC GAGTCGACCC GCGCCGGTGC GGTCCTGATC GCACCGAAGG ATCTGGAAAA GCTGGGCGCG GCCGCTCAAG GCCGGACGGC CGGCCCCCGC AACTTCATCG TGACGCCGAA TCCCTACGCG TACTTCGCGC GCGTCGCGCA GATGTTCATC GACCTCGCCA CGCCGCCGCG CGCGGCCGGC GTGCATCCGA GCGCGACGAT CGATCCGGCC GCGCAGGTCG CCGCGACCGC GGTGATCGGC CCGCACGTGA CGATCGAGGC CGGCGCGGTG ATCGAAGACG GCGTGCAGCT CGACGCGAAC GTGTTCGTCG GCCGCGGCAC GACGATCGGC GCCGGCTCGC ACTTTTATCC GAACGCATCG GTGTACCACG GCTGCAAGGT CGGCCCGCGC GCGATCGTCC ATGCGGGCGC CGTGATCGGC TCCGACGGCT TCGGCTTCGC ACCGGATTTC GTCGGCGACG GCGACGCGCG CACCGGCAGC TGGGTCAAGA TCCCGCAGGT CGGCGGCGTG ACGATCGGCC CGGACGTCGA AATCGGCGCG AACACGACGA TCGATCGCGG CGCGATGGCG GATACCGTCA TCGAGGAATG CGTGAAGATC GACAACCAGG TCCAGATCGG CCACAACTGC CGGATCGGCG CGTACACGGT GATCGCCGGC AGCGCCGGCA TCGCGGGCAG CACGACGATC GGCCGCCACT GCATGATCGG CGGCGCGGCC GGGATCGCCG GCCACGTGAC GCTCGGCGAC TACGTGATCA TCACCGCGAA GTCGGGCGTA TCGAAGTCGC TGCCGAAGGC CGGCATCTAT ACCAGCGCGT TTCCGGCCGT CGACCACGGC GAATGGAACA AGAGCGCCGC GCTCGTGCGC AACCTCGACA AGCTGCGCGA GCGCATCAAG GCGCTCGAAG CCGCGCTCGC CGCCCAGGGC GGCACCGACG CCTGA
|
Protein sequence | MALTLEELVK RFGGEIAGDA QCKVGGLAPL DQAGPQQLAF LANPKYLSQV ESTRAGAVLI APKDLEKLGA AAQGRTAGPR NFIVTPNPYA YFARVAQMFI DLATPPRAAG VHPSATIDPA AQVAATAVIG PHVTIEAGAV IEDGVQLDAN VFVGRGTTIG AGSHFYPNAS VYHGCKVGPR AIVHAGAVIG SDGFGFAPDF VGDGDARTGS WVKIPQVGGV TIGPDVEIGA NTTIDRGAMA DTVIEECVKI DNQVQIGHNC RIGAYTVIAG SAGIAGSTTI GRHCMIGGAA GIAGHVTLGD YVIITAKSGV SKSLPKAGIY TSAFPAVDHG EWNKSAALVR NLDKLRERIK ALEAALAAQG GTDA
|
| |