| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_2024 |
|---|
| Symbol | |
|---|
| ID | 6123688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2247291 |
|---|
| End bp | 2248073 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641638596 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_001765307 |
|---|
| Protein GI | 170733360 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.146805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCA TCACTTCCCG CGACAATCCG CTGTACAAGC GCCTGAAGGC GCTCGCGGGT
TCGACGCCCC ATCAGCGCCG CAGCGGCCAG GCGCTGCTCG AAGGTTTTCA TCTCGCGAGC
GCATACCTCG ATACGGGCGC GACGCCCGAG CTGTGCGTCA CGACCGAAGG TGCGCTCGGC
CATGCCGAGG CACAGGCGAT CGTCGCGCGC ATCGATATGC AGCGGATCGT CACGCTGCCG
GATGCGCTGT TCGGGCAGTT GTCGAATGTC GTCAACGGCG TCGGCTTTCT GCTGCTGGTC
GACCGGCCGA CGCACCCGCT GCCCGAACGC GTGACGCACA CGTCGGTCGT GCTCGACGGC
GTGCAGGATG CCGGCAACGT CGGCTCGATC CTGCGCAGCG CGGCGGCGGC CGGCGTGCGT
CACGTGTTCT GCGCGCCGGG GACGGCCTAT GCGTGGTCGT CGAAGGTGCT GCGCTCGGGC
ATGGGCGCGC ATTTCCTGCT GTCGATCCAT GAGGACGTCG AAGCTGAGGC GCTTGCCGAA
CGCCTCGACG TGCCGGTCGC GCTGACCGAC TCGCACGGCG CGCAGGCGGT CTACGACTGC
GACCTGTCGG GGCCCGTCGC CTGGGTGTTC GGCAACGAAG GTGCCGGCGT GTCGGCATTC
TGGCGCGACG CGGCCACGCA TCGCGTGACG ATTCCGCAGC CGGGCGGGAT GGAATCGCTG
AACGTCGCCG CGGCGGCGGC AGTGTGCCTG TTCGAGCAGG TGCGGCAGCA GCGACCGGCG
TGA
|
|---|
| Protein sequence | MKSITSRDNP LYKRLKALAG STPHQRRSGQ ALLEGFHLAS AYLDTGATPE LCVTTEGALG
HAEAQAIVAR IDMQRIVTLP DALFGQLSNV VNGVGFLLLV DRPTHPLPER VTHTSVVLDG
VQDAGNVGSI LRSAAAAGVR HVFCAPGTAY AWSSKVLRSG MGAHFLLSIH EDVEAEALAE
RLDVPVALTD SHGAQAVYDC DLSGPVAWVF GNEGAGVSAF WRDAATHRVT IPQPGGMESL
NVAAAAAVCL FEQVRQQRPA
|
|---|
| |