| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1991 |
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| Symbol | ldcA |
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| ID | 6123655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010508 |
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| Strand | - |
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| Start bp | 2214890 |
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| End bp | 2215828 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641638563 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_001765274 |
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| Protein GI | 170733327 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCC AGCCCGCCGC GTCCTACACC ATCCGCCTGC TGGCGCCGTC CGGCTATCCG
CACGACCCTG ACGCGATCAA CCGTGCGCTC GAGCGCCTCA GCACCGCGCA GCAGCGCATC
GAGAACATCG AGGCGACGCA GCGGCGCTTC CAGCGTTTCG GCGGCACCGA CGGCGAACGG
GCAGGCGACC TGAACCGCCT CGCCGATCCC GGGCGGGCGC TGCCGGACAT CGCGCTCGCG
GTGCGCGGCG GCTACGGCGC CGCGCGCATC CTGCACGGGC TCGACTATCG CGGGCTCGAA
CGCCGGCTGC GCGACCAGCC GATCGCGCTC GTCGGTCACA GCGATTTCAC GGCGATCCAG
CTGGCGCTGT ACGCGAAGGC GCGCATCAAG ACGTTCGGCG GTCCGATGCT GTCGGCGGAT
TTCGGCGCGG AAACGCCCAG CGACTTCACG ATGCAGCATT TCTGGCAGAC GCTGACGCAG
CCGAGCACGA CGATCGTCGC CGACGCACCG CAGGTGCAGA CGGTGAACGT GACGGGCACG
CTGTGGGGCG GTAACCTCGC GATCCTCACG TCGCTGGTCG GCACGCCGTA CATGCCCGAC
ATCGAGGGCG GCATCCTGTT CATCGAAGAC GTCAACGAGC AGCCGTTCCG GATCGAGCGG
ATGATCTATC AACTGCACCT GTCGGGGCTG CTCGCGCGGC AGCAGGCGCT CGTGCTCGGC
CAGTTCACCG GCGCGCGGCC GTTCGAGTAC GACAACGGCT ACGACATGCA GGCGATGATC
GACCAGGTGC GCGCGGTGGT CGGGATTCCG GTCGTCACGG GGCTCCAGTT CGGCCATGTG
CCCGACCTGT TGACGCTGCC GTTCGGCGCA CAGGCGCAGT TGGTCGCGAA CGCGCACGGG
TTCCGGCTTA CGCTGTCGGA CTATCCGCAT CTCGGCTGA
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| Protein sequence | MSFQPAASYT IRLLAPSGYP HDPDAINRAL ERLSTAQQRI ENIEATQRRF QRFGGTDGER
AGDLNRLADP GRALPDIALA VRGGYGAARI LHGLDYRGLE RRLRDQPIAL VGHSDFTAIQ
LALYAKARIK TFGGPMLSAD FGAETPSDFT MQHFWQTLTQ PSTTIVADAP QVQTVNVTGT
LWGGNLAILT SLVGTPYMPD IEGGILFIED VNEQPFRIER MIYQLHLSGL LARQQALVLG
QFTGARPFEY DNGYDMQAMI DQVRAVVGIP VVTGLQFGHV PDLLTLPFGA QAQLVANAHG
FRLTLSDYPH LG
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