| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_1990 |
|---|
| Symbol | |
|---|
| ID | 6123654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010508 |
|---|
| Strand | - |
|---|
| Start bp | 2213871 |
|---|
| End bp | 2214575 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641638562 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001765273 |
|---|
| Protein GI | 170733326 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.964349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCA TGAACGAGCC CGATTCCACT CCGTCCGGTG CAGCCGGCCC CGAAGCGATC
GCCGAGCGGA TTCGCACCGC GATCCTCGAG CATCGGCTCG CGCCAGGCGC GAAGCTGACG
GAGGCGCAGC TCTGCGACGT GTTCGGCGTG AAGCGCGGGA CGATCCGCCA GGCGCTCGCG
CAGCTCGCGA CCGACAAGCT GGTCGACCTC GAGCCGAACC GCGGCGCGTT CGTCGCGAGC
CCGACGCTGC AGGACGTGCA CGAGGTGTTC GAGATGCGCC GGATCATCGA GCTCGCCGTG
GTCGAACGGC TCGCGACCGG CCCCGGCGCC AAACGGCTGA AGGGCGTCGC CGCGCTGATC
GACAAGGAGC GCAAGGCGTT CGAGCGGCAC GACTTCGCGG CATGGATCCG GCTGTCGGGC
GAATTCCACA CGGCGCTCGC GACGCTGATG GGCAATGCGA CGCTCAGCGA GTGCCTCGAA
GGGCTCGTCG CACGCTCGAC GCTGATGTCG GCGCTGTACG AATCGCACGG GCGCAGCCCG
TGCTCGTGCG ACGACCACGA CGAGATCCTC GCCGCACTGG AGGCGGGCGA TCCGAAGCAG
GCGGTGACGC TGATGGCGCG CCACCTGCAG CATGTCGAAC TGAAGATGCT GGACCGGCCC
GCGCAAGGGC AGGTCGATTT GCGCGAAGTG TTCGGCGGCG CCTGA
|
|---|
| Protein sequence | MQIMNEPDST PSGAAGPEAI AERIRTAILE HRLAPGAKLT EAQLCDVFGV KRGTIRQALA
QLATDKLVDL EPNRGAFVAS PTLQDVHEVF EMRRIIELAV VERLATGPGA KRLKGVAALI
DKERKAFERH DFAAWIRLSG EFHTALATLM GNATLSECLE GLVARSTLMS ALYESHGRSP
CSCDDHDEIL AALEAGDPKQ AVTLMARHLQ HVELKMLDRP AQGQVDLREV FGGA
|
|---|
| |